RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	ZNF135	P52742	658 aa	Predicted RBP	11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	RWDD2B	P57060	319 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	AMPD2	Q01433	879 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	SEMA3B	Q13214	749 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	EFHC2	Q5JST6	749 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	ERMARD	Q5T6L9	678 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	MANEAL	Q5VSG8	457 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	DCAF12L1	Q5VU92	463 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	SCYL2	Q6P3W7	929 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	VIT	Q6UXI7	678 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174		Q6ZNB5	142 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	UNC45B	Q8IWX7	931 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	ATP6V0D2	Q8N8Y2	350 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	EXD1	Q8NHP7	514 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	RSPRY1	Q96DX4	576 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	RBM41	Q96IZ5	413 aa	Known RBP	11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	BTN2A3P	Q96KV6	586 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	ASB16	Q96NS5	453 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	HAPLN3	Q96S86	360 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	DCLK3	Q9C098	648 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	TKTL2	Q9H0I9	626 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	OSBPL2	Q9H1P3	480 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	EPC1	Q9H2F5	836 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	WDCP	Q9H6R7	721 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	TRPV4	Q9HBA0	871 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	PARD6A	Q9NPB6	346 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	ZSCAN32	Q9NX65	697 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	COX16	Q9P0S2	106 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	PCSK1N	Q9UHG2	260 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	STOML2	Q9UJZ1	356 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	SNX12	Q9UMY4	172 aa		11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	SMG5	Q9UPR3	1016 aa	Known RBP	11.41	□□□□□ -0.58
NAPA-222	ENST00000602174	C3orf70	A6NLC5	250 aa	Predicted RBP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ENC1	O14682	589 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	PAGE1	O75459	146 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	KRT1	P04264	644 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	TCP1	P17987	556 aa	Known RBP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	HOXC13	P31276	330 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	CASQ1	P31415	396 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	HTR7	P34969	479 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	GJC1	P36383	396 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	VIPR2	P41587	438 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	SSR1	P43307	286 aa	Known RBP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ZXDB	P98169	803 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	PDK2	Q15119	407 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ZNF77	Q15935	545 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	PPP2R5E	Q16537	467 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	TAZ	Q16635	292 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	SMTNL2	Q2TAL5	461 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ZNF852	Q6ZMS4	543 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	FAM217A	Q8IXS0	508 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	TSC1	Q92574	1164 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	DNASE1L2	Q92874	299 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	USP13	Q92995	863 aa	Predicted RBP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	FAF2	Q96CS3	445 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	CYP2S1	Q96SQ9	504 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	NELL2	Q99435	816 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ZNF670	Q9BS34	389 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	SLITRK6	Q9H5Y7	841 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	ZWILCH	Q9H900	591 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	PCDH18	Q9HCL0	1135 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	TDP1	Q9NUW8	608 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	OBP2A	Q9NY56	170 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	NCDN	Q9UBB6	729 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	NDRG2	Q9UN36	371 aa	Known RBP	11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	NEU3	Q9UQ49	428 aa		11.4	□□□□□ -0.58
NAPA-222	ENST00000602174	E2F8	A0AVK6	867 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	LEFTY2	O00292	366 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ARNTL	O00327	626 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	GFRA2	O00451	464 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ACSL4	O60488	711 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	KLKB1	P03952	638 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	HMBS	P08397	361 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	CORO1A	P31146	461 aa	Known RBP	11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	L1CAM	P32004	1257 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	HARS2	P49590	506 aa	Known RBP	11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	COPS2	P61201	443 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	DPYSL3	Q14195	570 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	GAS6	Q14393	721 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	CA9	Q16790	459 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ATP13A4	Q4VNC1	1196 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	KCNT1	Q5JUK3	1230 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ARTN	Q5T4W7	220 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	PIK3R6	Q5UE93	754 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	RALGAPA1	Q6GYQ0	2036 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	HTR3D	Q70Z44	454 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ZNF683	Q8IZ20	524 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	RIN3	Q8TB24	985 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	SH3RF2	Q8TEC5	729 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	HSPH1	Q92598	858 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	SMARCD2	Q92925	531 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	RNF34	Q969K3	372 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	WBP2	Q969T9	261 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	PBK	Q96KB5	322 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	C1orf74	Q96LT6	269 aa		11.39	□□□□□ -0.59
NAPA-222	ENST00000602174	KCTD15	Q96SI1	283 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms