RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 IZUMO3Q5VZ72 239 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 PLPP4Q5VZY2 271 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 MIB1Q86YT6 1006 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 TFB1MQ8WVM0 346 aaKnown RBP14.12□□□□□ -0.15
IRF3-229ENST00000601373 AZIN2Q96A70 460 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 PLD4Q96BZ4 506 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 RETREG1Q9H6L5 497 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 PAK5Q9P286 719 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 PPARGC1AQ9UBK2 798 aaKnown RBP14.12□□□□□ -0.15
IRF3-229ENST00000601373 FAM153AQ9UHL3 310 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 DPP7Q9UHL4 492 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 HS3ST4Q9Y661 456 aa14.12□□□□□ -0.15
IRF3-229ENST00000601373 C5orf60A6NFR6 353 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 WASH4PA8MWX3 477 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 E9PAM4 449 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 KCNN4O15554 427 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 MTSS1O43312 755 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 MFSD11O43934 449 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 GCATO75600 419 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 STK10O94804 968 aaKnown RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 FGF19O95750 216 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 F11P03951 625 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 C8AP07357 584 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 SPATA31D3P0C874 917 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 ZSCAN5DPP0CG00 497 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 SRGAP2BP0DMP2 458 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 ETS1P14921 441 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 PFKLP17858 780 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 RBL1P28749 1068 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 RPL22P35268 128 aaKnown RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 HARS2P49590 506 aaKnown RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 GDF10P55107 478 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 ZNF33AQ06730 810 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 GPS2Q13227 327 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 MORF4L2Q15014 288 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 ALS2CLQ60I27 953 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 HEATR6Q6AI08 1181 aaKnown RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 HIBCHQ6NVY1 386 aaPredicted RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 RWDD4Q6NW29 188 aaKnown RBP14.11□□□□□ -0.15
IRF3-229ENST00000601373 RHBDF2Q6PJF5 856 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 SPATA31D4Q6ZUB0 917 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 LRRC49Q8IUZ0 686 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 GDAP1L1Q96MZ0 367 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 PRDM12Q9H4Q4 367 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 SNX10Q9Y5X0 201 aa14.11□□□□□ -0.15
IRF3-229ENST00000601373 BDP1A6H8Y1 2624 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 GRXCR1A8MXD5 290 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 GRM6O15303 877 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 COCHO43405 550 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 PPFIA2O75334 1257 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 OAS1P00973 400 aaKnown RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 CA3P07451 260 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 RHOQP17081 205 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 DNAJB1P25685 340 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 CDC25CP30307 473 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 SLC11A2P49281 568 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 CLCN4P51793 760 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 DHX9Q08211 1270 aaKnown RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 GALNT2Q10471 571 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 AUHQ13825 339 aaKnown RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 PRKD1Q15139 912 aaPredicted RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 MS4A13Q5J8X5 152 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 PIK3R6Q5UE93 754 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 ELMSAN1Q6PJG2 1045 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 HOOK3Q86VS8 718 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 PPIL6Q8IXY8 311 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 GLIS1Q8NBF1 620 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 HTR3CQ8WXA8 447 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 MRPS31Q92665 395 aaKnown RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
IRF3-229ENST00000601373 C10orf88Q9H8K7 445 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 SLC28A3Q9HAS3 691 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 IL21Q9HBE4 155 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 SHOC2Q9UQ13 582 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 MFHAS1Q9Y4C4 1052 aa14.1□□□□□ -0.15
IRF3-229ENST00000601373 IGLV3-10A0A075B6K4 115 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 DRGXA6NNA5 263 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 H3BNC9 293 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 ACSL4O60488 711 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 SASH3O75995 380 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 HMBSP08397 361 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 MYOGP15173 224 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 HOXA9P31269 272 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 GPM6BQ13491 265 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 CFAP58Q5T655 872 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
IRF3-229ENST00000601373 TMC3Q7Z5M5 1100 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 PRUNE1Q86TP1 453 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 RTL3Q8N8U3 475 aaKnown RBP14.09□□□□□ -0.15
IRF3-229ENST00000601373 CCNYQ8ND76 341 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 HDAC11Q96DB2 347 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 PKNOX2Q96KN3 472 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 GCNAQ96QF7 691 aa14.09□□□□□ -0.15
IRF3-229ENST00000601373 KLF16Q9BXK1 252 aaPredicted RBP14.09□□□□□ -0.15
IRF3-229ENST00000601373 TXLNGYQ9BZA5 131 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms