RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SCNN1AP37088 669 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 NNMTP40261 264 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 MATKP42679 507 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 GABRB2P47870 512 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 TPMTP51580 245 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 SGSHP51688 502 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 ATXN3P54252 364 aaPredicted RBP16.19■□□□□ 0.18
IRF3-226ENST00000600453 RPS24P62847 133 aaKnown RBP16.19■□□□□ 0.18
IRF3-226ENST00000600453 GFPT1Q06210 699 aaPredicted RBP16.19■□□□□ 0.18
IRF3-226ENST00000600453 KRT31Q15323 416 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 TAF5Q15542 800 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 OLFML1Q6UWY5 402 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 FAM183BPQ6ZVS7 135 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 SND1Q7KZF4 910 aaKnown RBP eCLIP16.19■□□□□ 0.18
IRF3-226ENST00000600453 RGL4Q8IZJ4 473 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 CYB5D2Q8WUJ1 264 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 ERLEC1Q96DZ1 483 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 TOE1Q96GM8 510 aaKnown RBP16.19■□□□□ 0.18
IRF3-226ENST00000600453 PCED1AQ9H1Q7 454 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 TMEM74BQ9NUR3 256 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 FANCLQ9NW38 375 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
IRF3-226ENST00000600453 AJAP1Q9UKB5 411 aaPredicted RBP16.19■□□□□ 0.18
IRF3-226ENST00000600453 CKAP5Q14008 2032 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
IRF3-226ENST00000600453 DAB1O75553 588 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 GRAP2O75791 330 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 IGLV3-19P01714 112 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 ERBB2P04626 1255 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 SYPP08247 313 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 C7P10643 843 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 COPAP53621 1224 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 MYL5Q02045 173 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 PTPRNQ16849 979 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 PTPN20Q4JDL3 420 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 CFAP52Q8N1V2 620 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 DEFB119Q8N690 84 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 LMLNQ96KR4 655 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
IRF3-226ENST00000600453 SLC6A17Q9H1V8 727 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.18■□□□□ 0.18
IRF3-226ENST00000600453 SCML1Q9UN30 329 aa16.18■□□□□ 0.18
IRF3-226ENST00000600453 SYNJ2BP-COX16A0A087WUM0 186 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
IRF3-226ENST00000600453 LRRC10BA6NIK2 292 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 PATE3B3GLJ2 98 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 F8VZ95 297 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 M0QYT0 321 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 DNTTP04053 509 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 CFIP05156 583 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 PNMA6AP0CW24 399 aaPredicted RBP16.17■□□□□ 0.18
IRF3-226ENST00000600453 HLA-EP13747 358 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 CSKP41240 450 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 NME3Q13232 169 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 ARID5BQ14865 1188 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 BRMS1LQ5PSV4 323 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 RNF219Q5W0B1 726 aaPredicted RBP16.17■□□□□ 0.18
IRF3-226ENST00000600453 SLC41A1Q8IVJ1 513 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 WFDC5Q8TCV5 224 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 HSPA12BQ96MM6 686 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
IRF3-226ENST00000600453 SPAG5Q96R06 1193 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 WDCPQ9H6R7 721 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 PRSS16Q9NQE7 514 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 COX16Q9P0S2 106 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 NCKAP1Q9Y2A7 1128 aa16.17■□□□□ 0.18
IRF3-226ENST00000600453 A0A1B0GVM2 712 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 TCAF2A6NFQ2 919 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 METTL12A8MUP2 240 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 MEI4A8MW99 385 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 CDX4O14627 284 aaPredicted RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 ADRB1P08588 477 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 STAT1P42224 750 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 PLK1P53350 603 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 COPB1P53618 953 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 RNASE9P60153 205 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 POLR2FP61218 127 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 ECT2LQ008S8 904 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 TTC31Q49AM3 519 aaPredicted RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 PITRM1Q5JRX3 1037 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 ARCQ7LC44 396 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 DNASE2BQ8WZ79 361 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 PGAP3Q96FM1 320 aaPredicted RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 PRMT1Q99873 361 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 GPR174Q9BXC1 333 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 LIMA1Q9UHB6 759 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 XPO7Q9UIA9 1087 aaKnown RBP16.16■□□□□ 0.18
IRF3-226ENST00000600453 ERVW-1Q9UQF0 538 aa16.16■□□□□ 0.18
IRF3-226ENST00000600453 TNRC6BQ9UPQ9 1833 aaKnown RBP16.15■□□□□ 0.18
IRF3-226ENST00000600453 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.15■□□□□ 0.18
IRF3-226ENST00000600453 ENGP17813 658 aa16.15■□□□□ 0.18
IRF3-226ENST00000600453 CSRP1P21291 193 aaKnown RBP16.15■□□□□ 0.18
IRF3-226ENST00000600453 SOX5P35711 763 aa16.15■□□□□ 0.18
IRF3-226ENST00000600453 PITX1P78337 314 aaPredicted RBP16.15■□□□□ 0.18
IRF3-226ENST00000600453 ZNF177Q13360 481 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms