RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PEX26Q7Z412 305 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 ETFBKMTQ8IXQ9 262 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 FAM71BQ8TC56 605 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 WFDC5Q8TCV5 224 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 TBC1D31Q96DN5 1066 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 AMFRQ9UKV5 643 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 TTC28Q96AY4 2481 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 TRIM24O15164 1050 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CACNG3O60359 315 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 KRT1P04264 644 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 GOT1P17174 413 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CTNNA2P26232 953 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 HOXC13P31276 330 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CTHP32929 405 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CTNNA1P35221 906 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CDH6P55285 790 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 MMRN1Q13201 1228 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 SLC44A4Q53GD3 710 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 RABGAP1LQ5R372 815 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 MPP7Q5T2T1 576 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 ASTLQ6HA08 431 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 RWDD4Q6NW29 188 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 TXNDC11Q6PKC3 985 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 ANKS1BQ7Z6G8 1248 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 TSC1Q92574 1164 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 EPAS1Q99814 870 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 KCND1Q9NSA2 647 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CWC15Q9P013 229 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 PPARGC1AQ9UBK2 798 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF212Q9UDV6 495 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 CA14Q9ULX7 337 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 PIAS3Q9Y6X2 628 aa20.63■□□□□ 0.89
SHKBP1-222ENST00000600320 SPECC1L-ADORA2AF8WAN1 911 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 PI4K2BG5E9Z4 385 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 EEF2KO00418 725 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 DDX3YO15523 660 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 LUC7L3O95232 432 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 KDELR1P24390 212 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 IL4RP24394 825 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 TPI1P60174 286 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 MESP2Q0VG99 397 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 DPYSL3Q14195 570 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 KRT81Q14533 505 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 ZFYVE27Q5T4F4 411 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 UBALD2Q8IYN6 164 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 ALS2CR12Q96Q35 445 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 ZYG11BQ9C0D3 744 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 FBXO10Q9UK96 956 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 ZKSCAN5Q9Y2L8 839 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 PCDHA3Q9Y5H8 950 aa20.62■□□□□ 0.89
SHKBP1-222ENST00000600320 MUC3AQ02505 3323 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 A0A1B0GVM2 712 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 LRRD1A4D1F6 860 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 KRBA1A5PL33 1030 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 GOLGA6L9A6NEM1 432 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TCAF2A6NFQ2 919 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 C3orf70A6NLC5 250 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 H3BRJ5 948 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TULP3O75386 442 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 CISD3P0C7P0 127 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 EPHB2P29323 1055 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 PEX5P50542 639 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 ZXDAP98168 799 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 MLF2Q15773 248 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 FSCBQ5H9T9 825 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TTC39BQ5VTQ0 682 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 RFX8Q6ZV50 586 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 CHST9Q7L1S5 443 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TFAP2DQ7Z6R9 452 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 NLRP14Q86W24 1093 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 SLC35F6Q8N357 371 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 CARNMT1Q8N4J0 409 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 KCTD6Q8NC69 237 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TRIM58Q8NG06 486 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 OR52K2Q8NGK3 314 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 ALG3Q92685 438 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 RNF25Q96BH1 459 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 CSPG4P5Q96PW8 444 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 C8orf33Q9H7E9 229 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 FBRSL1Q9HCM7 1045 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 NDFIP2Q9NV92 336 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 DNAJC17Q9NVM6 304 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 DDX56Q9NY93 547 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 DOCK4Q8N1I0 1966 aa20.61■□□□□ 0.89
SHKBP1-222ENST00000600320 TYW5A2RUC4 315 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 RHOQP17081 205 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 AMPD1P23109 780 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 DNA2P51530 1060 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 CDH4P55283 916 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 DPYSQ14117 519 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 PDK2Q15119 407 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF569Q5MCW4 686 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 MEI1Q5TIA1 1274 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 CXorf57Q6NSI4 855 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 TPRG1Q6ZUI0 275 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 RALGPS2Q86X27 583 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 MFN1Q8IWA4 741 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 KATNAL2Q8IYT4 538 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 PHTF2Q8N3S3 785 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms