RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 H0Y626 953 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 GIPC1O14908 333 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 DNTTP04053 509 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
VRK3-221ENST00000600284 TACR2P21452 398 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 CCR1P32246 355 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 CSKP41240 450 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 SLC12A1Q13621 1099 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 TAF5Q15542 800 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
VRK3-221ENST00000600284 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 CHSY1Q86X52 802 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 LGI2Q8N0V4 545 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 DEFB106AQ8N104 65 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 CFAP52Q8N1V2 620 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
VRK3-221ENST00000600284 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
VRK3-221ENST00000600284 MYO19Q96H55 970 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 TMEM51Q9NW97 253 aa16.35■□□□□ 0.21
VRK3-221ENST00000600284 XPO7Q9UIA9 1087 aaKnown RBP16.35■□□□□ 0.21
VRK3-221ENST00000600284 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 F5H5T6 163 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 MAOBP27338 520 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 OXCT1P55809 520 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 RPS14P62263 151 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 ZNF252P-AS1Q0IIN9 211 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 KCNMA1Q12791 1236 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 SFSWAPQ12872 951 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 HNRNPDQ14103 355 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 HNRNPA1L2Q32P51 320 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 TTC31Q49AM3 519 aaPredicted RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 FSCBQ5H9T9 825 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 PITRM1Q5JRX3 1037 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 ZNF776Q68DI1 518 aaPredicted RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 OR6B2Q6IFH4 312 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 OLFML1Q6UWY5 402 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 SLC26A9Q7LBE3 791 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 SLC47A2Q86VL8 602 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 PASD1Q8IV76 773 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 ZNF366Q8N895 744 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 DEFB124Q8NES8 71 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 MRGPRX3Q96LB0 322 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 PRMT1Q99873 361 aaKnown RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 BTBD1Q9H0C5 482 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 RSPH9Q9H1X1 276 aaPredicted RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 FAM204AQ9H8W3 233 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 SGK2Q9HBY8 427 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 FSCN3Q9NQT6 498 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 DDIT4Q9NX09 232 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 RRN3Q9NYV6 651 aa16.34■□□□□ 0.21
VRK3-221ENST00000600284 AJAP1Q9UKB5 411 aaPredicted RBP16.34■□□□□ 0.21
VRK3-221ENST00000600284 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.21
VRK3-221ENST00000600284 PCDH15Q96QU1 1955 aa16.33■□□□□ 0.21
VRK3-221ENST00000600284 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 BCAT2O15382 392 aaPredicted RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 RNASEH1O60930 286 aaKnown RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 GJB3O75712 270 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 ERBB2P04626 1255 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 NOS2P35228 1153 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 PLK1P53350 603 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 PITX1P78337 314 aaPredicted RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 ECT2LQ008S8 904 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 KCNJ12Q14500 433 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 DRAP1Q14919 205 aaPredicted RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 RABGAP1LQ5R372 815 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 FAM183BPQ6ZVS7 135 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 USP30Q70CQ3 517 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 TMEM35BQ8NCS4 154 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 RNF34Q969K3 372 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 PPP1R9BQ96SB3 815 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 SYNCQ9H7C4 482 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 OSGEPQ9NPF4 335 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 SAMSN1Q9NSI8 373 aaKnown RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 ERVW-1Q9UQF0 538 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 NCKAP1Q9Y2A7 1128 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.2
VRK3-221ENST00000600284 ASCC3Q8N3C0 2202 aaKnown RBP16.33■□□□□ 0.2
VRK3-221ENST00000600284 A0A1B0GVM2 712 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 TCAF2A6NFQ2 919 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 DAB1O75553 588 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 CYP11B1P15538 503 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 ACSL1P33121 698 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 SCNN1AP37088 669 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 MATKP42679 507 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 GABRB2P47870 512 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 IL27RAQ6UWB1 636 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
VRK3-221ENST00000600284 FAM124AQ86V42 546 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms