RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 STK32AQ8WU08 396 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 SNX19Q92543 992 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 FAM81BQ96LP2 452 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 TUBGCP2Q9BSJ2 902 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 PCED1AQ9H1Q7 454 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 EIF2B4Q9UI10 523 aaKnown RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 E5RJQ4 531 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 GJB3O75712 270 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 APOEP02649 317 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 SLC9A1P19634 815 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 RDXP35241 583 aaKnown RBP19.41■□□□□ 0.7
PNKP-213ENST00000599543 ST8SIA6P61647 398 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 RPS24P62847 133 aaKnown RBP19.41■□□□□ 0.7
PNKP-213ENST00000599543 ZBTB16Q05516 673 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 NCAPHQ15003 741 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 MAN2A1Q16706 1144 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 ZSCAN23Q3MJ62 389 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 TTC31Q49AM3 519 aaPredicted RBP19.41■□□□□ 0.7
PNKP-213ENST00000599543 MIIPQ5JXC2 388 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 CDKAL1Q5VV42 579 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 BEND5Q7L4P6 421 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 CARNMT1Q8N4J0 409 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 ZNF606Q8WXB4 792 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 SLC4A5Q9BY07 1137 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 NUCKS1Q9H1E3 243 aaKnown RBP19.41■□□□□ 0.7
PNKP-213ENST00000599543 VPS16Q9H269 839 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 PRSS16Q9NQE7 514 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 SUN2Q9UH99 717 aa19.41■□□□□ 0.7
PNKP-213ENST00000599543 PAPSS1O43252 624 aaPredicted RBP19.4■□□□□ 0.7
PNKP-213ENST00000599543 HYAL3O43820 417 aaPredicted RBP19.4■□□□□ 0.7
PNKP-213ENST00000599543 CER1O95813 267 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 ACSL1P33121 698 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 USP8P40818 1118 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 KRT31Q15323 416 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 SKOR2Q2VWA4 1001 aaPredicted RBP19.4■□□□□ 0.7
PNKP-213ENST00000599543 VWA3BQ502W6 1294 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 MS4A13Q5J8X5 152 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 SYPL2Q5VXT5 272 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 ZNF776Q68DI1 518 aaPredicted RBP19.4■□□□□ 0.7
PNKP-213ENST00000599543 SLC39A13Q96H72 371 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 BTBD1Q9H0C5 482 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 NDST4Q9H3R1 872 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 POPDC2Q9HBU9 364 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 TJP2Q9UDY2 1190 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 CYTH4Q9UIA0 394 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 PCDHB9Q9Y5E1 797 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 CABIN1Q9Y6J0 2220 aa19.4■□□□□ 0.7
PNKP-213ENST00000599543 TMEM131Q92545 1883 aa19.39■□□□□ 0.7
PNKP-213ENST00000599543 TP53BP1Q12888 1972 aaPredicted RBP19.39■□□□□ 0.7
PNKP-213ENST00000599543 H0Y626 953 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 SH3BP5O60239 455 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 TRIM16O95361 564 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 SEMA4FO95754 770 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 ASLP04424 464 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 C7P10643 843 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 CSKP41240 450 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 RPS14P62263 151 aaKnown RBP19.39■□□□□ 0.69
PNKP-213ENST00000599543 YWHAZP63104 245 aaKnown RBP19.39■□□□□ 0.69
PNKP-213ENST00000599543 PDCLQ13371 301 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 ARHGAP44Q17R89 818 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 GBP6Q6ZN66 633 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 TMEM110Q86TL2 294 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 NAXDQ8IW45 347 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 DHX40Q8IX18 779 aaKnown RBP19.39■□□□□ 0.69
PNKP-213ENST00000599543 CFAP52Q8N1V2 620 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 TTC17Q96AE7 1141 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 MYEOVQ96EZ4 313 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 LMLNQ96KR4 655 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 HSD3B7Q9H2F3 369 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 C6orf106Q9H6K1 298 aaPredicted RBP19.39■□□□□ 0.69
PNKP-213ENST00000599543 ACP6Q9NPH0 428 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 APEX2Q9UBZ4 518 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 AJAP1Q9UKB5 411 aaPredicted RBP19.39■□□□□ 0.69
PNKP-213ENST00000599543 ZZEF1O43149 2961 aa19.39■□□□□ 0.69
PNKP-213ENST00000599543 RNASEH1O60930 286 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 LUC7L3O95232 432 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 MOCS3O95396 460 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 TRUB2O95900 331 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 ATP1A3P13637 1013 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 MATKP42679 507 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 AFF3P51826 1226 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 FAM193AP78312 1265 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 ZNF423Q2M1K9 1284 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 DCAF6Q58WW2 860 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 ZC3H12AQ5D1E8 599 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 CHSY1Q86X52 802 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 LGI2Q8N0V4 545 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 BTN2A3PQ96KV6 586 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 CAMK1GQ96NX5 476 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 RSPH9Q9H1X1 276 aaPredicted RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 GAREM1Q9H706 876 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 XPO7Q9UIA9 1087 aaKnown RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.38■□□□□ 0.69
PNKP-213ENST00000599543 NEUROG3Q9Y4Z2 214 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 CEP83Q9Y592 693 aa19.38■□□□□ 0.69
PNKP-213ENST00000599543 EEF1GP26641 437 aaKnown RBP19.37■□□□□ 0.69
PNKP-213ENST00000599543 ZNF165P49910 485 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 TRIP6Q15654 476 aaKnown RBP19.37■□□□□ 0.69
PNKP-213ENST00000599543 EXOC3L4Q17RC7 722 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms