RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 GZMAP12544 262 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 GPD1P21695 349 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RRM1P23921 792 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 CASP14P31944 242 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RFC1P35251 1148 aaPredicted RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 PTPN9P43378 593 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 LMAN2Q12907 356 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 SIM2Q14190 667 aaPredicted RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 ZNF234Q14588 700 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 E2F5Q15329 346 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RAB6CQ53S08 254 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 TTC39BQ5VTQ0 682 aaPredicted RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 HGSNATQ68CP4 663 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 MBLAC2Q68D91 279 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 WDR59Q6PJI9 974 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 PRR23BQ6ZRT6 265 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 C14orf80Q86SX3 495 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 ADIPOR2Q86V24 386 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 CIR1Q86X95 450 aaPredicted RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 FAM131BQ86XD5 332 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 DNAAF5Q86Y56 855 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 CCAR2Q8N163 923 aaKnown RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 MDGA1Q8NFP4 955 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 IGSF8Q969P0 613 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 VCPIP1Q96JH7 1222 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 LMLNQ96KR4 655 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RPRD1AQ96P16 312 aaPredicted RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 TPSD1Q9BZJ3 242 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RAB6CQ9H0N0 254 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 RAD54BQ9Y620 910 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 BZW2Q9Y6E2 419 aaKnown RBP14.31□□□□□ -0.12
UPF1-205ENST00000598209 STON1Q9Y6Q2 735 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 MYO15AQ9UKN7 3530 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 THADAQ6YHU6 1953 aa14.31□□□□□ -0.12
UPF1-205ENST00000598209 A0A1B0GVM2 712 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 TCAF2A6NFQ2 919 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
UPF1-205ENST00000598209 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
UPF1-205ENST00000598209 SERPING1P05155 500 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 POLR2EP19388 210 aaKnown RBP14.3□□□□□ -0.12
UPF1-205ENST00000598209 IL12RB1P42701 662 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 IRAK1P51617 712 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 ENPP2Q13822 863 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 FUT11Q495W5 492 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 PPP1R15BQ5SWA1 713 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 SH3PXD2AQ5TCZ1 1133 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 SPECC1LQ69YQ0 1117 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 KIAA1211LQ6NV74 962 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 CEP68Q76N32 757 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 CYB5D2Q8WUJ1 264 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 HMGB4Q8WW32 186 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
UPF1-205ENST00000598209 ERLEC1Q96DZ1 483 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 MCEEQ96PE7 176 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 KIAA1522Q9P206 1035 aaPredicted RBP14.3□□□□□ -0.12
UPF1-205ENST00000598209 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
UPF1-205ENST00000598209 RAB23Q9ULC3 237 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 CEP192Q8TEP8 1941 aa14.3□□□□□ -0.12
UPF1-205ENST00000598209 NYNRINQ9P2P1 1898 aaKnown RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 ABCA7Q8IZY2 2146 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 PIEZO1Q92508 2521 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ANKRD62A6NC57 917 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 RTN2O75298 545 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ATP5BP06576 529 aaKnown RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 PLEKP08567 350 aaPredicted RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 GABRG2P18507 467 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 PRKCHP24723 683 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 RPL7AP62424 266 aaKnown RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 TRIM14Q14142 442 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 LPAL2Q16609 132 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 FNDC3BQ53EP0 1204 aaKnown RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 ACBD5Q5T8D3 534 aaPredicted RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 DCUN1D2Q6PH85 259 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 SERPINA13PQ6UXR4 307 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 VPS36Q86VN1 386 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 VSTM4Q8IW00 320 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ZNF683Q8IZ20 524 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 PGBD3Q8N328 593 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 C1orf74Q96LT6 269 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 HAPLN3Q96S86 360 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
UPF1-205ENST00000598209 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ADAMTS1Q9UHI8 967 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 INTS6Q9UL03 887 aaKnown RBP14.29□□□□□ -0.12
UPF1-205ENST00000598209 PLA2G4CQ9UP65 541 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 FAM186AA6NE01 2351 aa14.29□□□□□ -0.12
UPF1-205ENST00000598209 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 CCP110O43303 1012 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 MOCS3O95396 460 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 DLDP09622 509 aaKnown RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 CSKP41240 450 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms