RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 GANCQ8TET4 914 aa16.52■□□□□ 0.24
LINC02560-201ENST00000596379 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 PRICKLE1Q96MT3 831 aaPredicted RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 DDX50Q9BQ39 737 aaKnown RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 ORAI3Q9BRQ5 295 aa16.52■□□□□ 0.24
LINC02560-201ENST00000596379 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 PABPC3Q9H361 631 aaKnown RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 FBXL12Q9NXK8 326 aa16.52■□□□□ 0.24
LINC02560-201ENST00000596379 INTS6Q9UL03 887 aaKnown RBP16.52■□□□□ 0.24
LINC02560-201ENST00000596379 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
LINC02560-201ENST00000596379 GPSM3Q9Y4H4 160 aa16.52■□□□□ 0.24
LINC02560-201ENST00000596379 TYW5A2RUC4 315 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 FAM47DPA6NHR8 397 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 H0Y8X5 98 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 PSMA7O14818 248 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 DKK1O94907 266 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 IGHV4-34P06331 123 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 CETN1Q12798 172 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 STIM1Q13586 685 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 HNRNPA1L2Q32P51 320 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 MS4A13Q5J8X5 152 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 USP30Q70CQ3 517 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 ADAT2Q7Z6V5 191 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 MARCH9Q86YJ5 346 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 DHX40Q8IX18 779 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 CFAP52Q8N1V2 620 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 ADAM32Q8TC27 787 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 IGSF8Q969P0 613 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 MRGPRX3Q96LB0 322 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 ACACAQ13085 2346 aa16.51■□□□□ 0.23
LINC02560-201ENST00000596379 DSPP15924 2871 aaKnown RBP16.51■□□□□ 0.23
LINC02560-201ENST00000596379 PLXNA2O75051 1894 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 PCDHGA12O60330 932 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 RNASEH1O60930 286 aaKnown RBP16.5■□□□□ 0.23
LINC02560-201ENST00000596379 ASLP04424 464 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 CTSOP43234 321 aaPredicted RBP16.5■□□□□ 0.23
LINC02560-201ENST00000596379 CTSKP43235 329 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 GPD2P43304 727 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 CCT8P50990 548 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 GALCP54803 685 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 CDH18Q13634 790 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 C9orf64Q5T6V5 341 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 MMAAQ8IVH4 418 aaKnown RBP16.5■□□□□ 0.23
LINC02560-201ENST00000596379 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
LINC02560-201ENST00000596379 EHBP1Q8NDI1 1231 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 FAM149B1Q96BN6 582 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 SLC39A13Q96H72 371 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 SERPINB11Q96P15 392 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 NEUROG2Q9H2A3 272 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 SERGEFQ9UGK8 458 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
LINC02560-201ENST00000596379 ERVW-1Q9UQF0 538 aa16.5■□□□□ 0.23
LINC02560-201ENST00000596379 TP53BP1Q12888 1972 aaPredicted RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 A0A1W2PP55 124 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 A0A1W2PPC4 97 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 TTC34A8MYJ7 566 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 MID1O15344 667 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 P4HA2O15460 535 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 TNFSF14O43557 240 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 LUC7L3O95232 432 aaKnown RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 GRK6P43250 576 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 RPL34P49207 117 aaKnown RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 RACK1P63244 317 aaKnown RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 IL9RQ01113 521 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 GCNT1Q02742 428 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 SFSWAPQ12872 951 aaKnown RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 CST6Q15828 149 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 CCDC157Q569K6 752 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 DCAF6Q58WW2 860 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 PRAMEF14Q5SWL7 426 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 KLHL10Q6JEL2 608 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 KDM1BQ8NB78 822 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 EBF2Q9HAK2 575 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 BAHCC1Q9P281 2608 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 XPO7Q9UIA9 1087 aaKnown RBP16.49■□□□□ 0.23
LINC02560-201ENST00000596379 SLCO3A1Q9UIG8 710 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
LINC02560-201ENST00000596379 APC2O95996 2303 aa16.48■□□□□ 0.23
LINC02560-201ENST00000596379 URB1O60287 2271 aaKnown RBP16.48■□□□□ 0.23
LINC02560-201ENST00000596379 TARSL2A2RTX5 802 aaKnown RBP16.48■□□□□ 0.23
LINC02560-201ENST00000596379 VILLO15195 856 aa16.48■□□□□ 0.23
LINC02560-201ENST00000596379 RNASEH2AO75792 299 aaKnown RBP16.48■□□□□ 0.23
LINC02560-201ENST00000596379 MOCS3O95396 460 aa16.48■□□□□ 0.23
LINC02560-201ENST00000596379 SLC8A1P32418 973 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms