RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 GGA2Q9UJY4 613 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 TYW5A2RUC4 315 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 TMEM191CA6NGB0 347 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 ATG13O75143 517 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CNTN5O94779 1100 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 MYBL1P10243 752 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PABPC1P11940 636 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PSMA2P25787 234 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CDH18Q13634 790 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC18A3Q16572 532 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 FUT11Q495W5 492 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PREPLQ4J6C6 727 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 ALFQ53S48 1182 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 MPP7Q5T2T1 576 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 DAB2IPQ5VWQ8 1189 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 SCYL2Q6P3W7 929 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 SYT13Q7L8C5 426 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CCAR2Q8N163 923 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 ARFGAP1Q8N6T3 406 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 FIBINQ8TAL6 211 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CYB5D2Q8WUJ1 264 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 ATOH1Q92858 354 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 TRIM11Q96F44 468 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 BTBD6Q96KE9 485 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PHOX2BQ99453 314 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CIPCQ9C0C6 399 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 DEF6Q9H4E7 631 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 CACNA2D2Q9NY47 1150 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 MPP6Q9NZW5 540 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 MMP17Q9ULZ9 603 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 STARD13Q9Y3M8 1113 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PAXBP1Q9Y5B6 917 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 R4GN57 208 aa14.23□□□□□ -0.13
SHKBP1-207ENST00000595631 PLXND1Q9Y4D7 1925 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 WASH3PC4AMC7 463 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 E9PAM4 449 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM72CH0Y354 149 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 H0Y626 953 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 AKR1B10O60218 316 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 SRGAP2O75044 1071 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 CYP1A2P05177 515 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 ADRA1BP35368 520 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 FNTBP49356 437 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 RABGAP1LQ5R372 815 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM72AQ5TYM5 149 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM72DQ6L9T8 149 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 NUDT18Q6ZVK8 323 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 KIAA0907Q7Z7F0 614 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM72BQ86X60 149 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 OR52K2Q8NGK3 314 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 ACDQ96AP0 544 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 HAPLN3Q96S86 360 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 PEBP4Q96S96 227 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 NUP85Q9BW27 656 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 GPATCH2LQ9NWQ4 482 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 ELOVL2Q9NXB9 296 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 INTS6Q9UL03 887 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC8A2Q9UPR5 921 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 RAD54BQ9Y620 910 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 NUP205Q92621 2012 aa14.22□□□□□ -0.13
SHKBP1-207ENST00000595631 A0A1B0GVM2 712 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 CSKP41240 450 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 NHLH1Q02575 133 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 MTA1Q13330 715 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 C5orf22Q49AR2 442 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 MBLAC2Q68D91 279 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 CXorf57Q6NSI4 855 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 CHPFQ8IZ52 775 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 APCDD1Q8J025 514 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 AHI1Q8N157 1196 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 PYROXD2Q8N2H3 581 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 SPC24Q8NBT2 197 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 CCDC26Q8TAB7 109 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 WFIKKN2Q8TEU8 576 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 C1orf74Q96LT6 269 aa14.21□□□□□ -0.13
SHKBP1-207ENST00000595631 IGLV3-10A0A075B6K4 115 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 HOXB2P14652 356 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 TCF4P15884 667 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 PRKCHP24723 683 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 NTSR1P30989 418 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 IL12RB1P42701 662 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 SRSF5Q13243 272 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF234Q14588 700 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 CRY1Q16526 586 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF528Q3MIS6 628 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ARL13BQ3SXY8 428 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 PITRM1Q5JRX3 1037 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms