RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FBXO36Q8NEA4 188 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 ADAM32Q8TC27 787 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 STMN2Q93045 179 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 FAF2Q96CS3 445 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 HIC2Q96JB3 615 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 CSPG4P5Q96PW8 444 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 WDR83Q9BRX9 315 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 MFHAS1Q9Y4C4 1052 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 M0QYT0 321 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 NRP1O14786 923 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 BRCC3P46736 316 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 NKX3-2P78367 333 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 SLC10A2Q12908 348 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 SPARCL1Q14515 664 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 PDK4Q16654 411 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 STRADAQ7RTN6 431 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 GPRIN1Q7Z2K8 1008 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 MRPL10Q7Z7H8 261 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 SMOQ99835 787 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 ULBP1Q9BZM6 244 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 ETNK2Q9NVF9 386 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 CLUHO75153 1309 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 PRPF4O43172 522 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 AVILO75366 819 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 DAB1O75553 588 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 AMPD1P23109 780 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 DNAJC3Q13217 504 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 PCSK9Q8NBP7 692 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 NETO2Q8NC67 525 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 KCTD13Q8WZ19 329 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 ANGPTL2Q9UKU9 493 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 RASA4BC9J798 803 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 GSC2O15499 205 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 RASA4O43374 803 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 PABPC4LP0CB38 370 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 RPL9P32969 192 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 EFTUD2Q15029 972 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 OTUD1Q5VV17 481 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 C3orf62Q6ZUJ4 267 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 MARK2Q7KZI7 788 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 MYLK4Q86YV6 388 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 DENND1AQ8TEH3 1009 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 GPBP1L1Q9HC44 474 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 EURLQ9NYK6 297 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
SHKBP1-205ENST00000594973 YJEFN3A6XGL0 299 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 USP17L7P0C7H9 530 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 NOS2P35228 1153 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 NLRP9Q7RTR0 991 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 CLNKQ7Z7G1 428 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 PALM2Q8IXS6 379 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 SLC7A14Q8TBB6 771 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 POPDC2Q9HBU9 364 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 PAK5Q9P286 719 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 FZD10Q9ULW2 581 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 CHMP2BQ9UQN3 213 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 BCLAF3A2AJT9 711 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 F8W810 466 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ZNF623O75123 536 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ASLP04424 464 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 UBTFL6P0CB48 400 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 YY1P25490 414 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ARL4AP40617 200 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 NOGQ13253 232 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 KCNT2Q6UVM3 1135 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 RNF180Q86T96 592 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ATP11CQ8NB49 1132 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 ZMIZ2Q8NF64 920 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 PIGVQ9NUD9 493 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 NDUFA13Q9P0J0 144 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 CDH9Q9ULB4 789 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 STAP1Q9ULZ2 295 aa17.54■□□□□ 0.4
SHKBP1-205ENST00000594973 APRTP07741 180 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 ODC1P11926 461 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 KRT15P19012 456 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 ACLYP53396 1101 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 DEUP1Q05D60 604 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 PTK7Q13308 1070 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 DSC3Q14574 896 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 KCNJ11Q14654 390 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 NCBP2-AS2Q69YL0 99 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 IGDCC3Q8IVU1 814 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 TRIM42Q8IWZ5 723 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 IRGQQ8WZA9 623 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 MAML1Q92585 1016 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 HHIPL1Q96JK4 782 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 NPY6RQ99463 290 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 RTP3Q9BQQ7 232 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 SMG5Q9UPR3 1016 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 ATP9BO43861 1147 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 ITGB1P05556 798 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 NCAM1P13591 858 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 ZFXP17010 805 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 PHBP35232 272 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms