RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
VRK3-206ENST00000594090 FAM172AQ8WUF8 416 aa15.04■□□□□ -0
VRK3-206ENST00000594090 NKD2Q969F2 451 aaPredicted RBP15.04■□□□□ -0
VRK3-206ENST00000594090 IGSF8Q969P0 613 aa15.04■□□□□ -0
VRK3-206ENST00000594090 GABRG3Q99928 467 aa15.04■□□□□ -0
VRK3-206ENST00000594090 SIK2Q9H0K1 926 aa15.04■□□□□ -0
VRK3-206ENST00000594090 ISCUQ9H1K1 167 aa15.04■□□□□ -0
VRK3-206ENST00000594090 SEMA4AQ9H3S1 761 aa15.04■□□□□ -0
VRK3-206ENST00000594090 POLMQ9NP87 494 aaPredicted RBP15.04■□□□□ -0
VRK3-206ENST00000594090 TMPRSS4Q9NRS4 437 aa15.04■□□□□ -0
VRK3-206ENST00000594090 PARVAQ9NVD7 372 aa15.04■□□□□ -0
VRK3-206ENST00000594090 ARHGAP20Q9P2F6 1191 aa15.04■□□□□ -0
VRK3-206ENST00000594090 EBF1Q9UH73 591 aa15.04■□□□□ -0
VRK3-206ENST00000594090 ADAMTS1Q9UHI8 967 aa15.04■□□□□ -0
VRK3-206ENST00000594090 EML5Q05BV3 1969 aa15.04■□□□□ -0
VRK3-206ENST00000594090 ANKRD62A6NC57 917 aa15.03■□□□□ -0
VRK3-206ENST00000594090 H0Y626 953 aa15.03■□□□□ -0
VRK3-206ENST00000594090 NPC1O15118 1278 aa15.03■□□□□ -0
VRK3-206ENST00000594090 AXIN1O15169 862 aa15.03■□□□□ -0
VRK3-206ENST00000594090 CCP110O43303 1012 aa15.03■□□□□ -0
VRK3-206ENST00000594090 TIMM44O43615 452 aa15.03■□□□□ -0
VRK3-206ENST00000594090 TPM1P09493 284 aa15.03■□□□□ -0
VRK3-206ENST00000594090 IRAK1P51617 712 aa15.03■□□□□ -0
VRK3-206ENST00000594090 ZNF143P52747 638 aaPredicted RBP15.03■□□□□ -0
VRK3-206ENST00000594090 HDAC4P56524 1084 aa15.03■□□□□ -0
VRK3-206ENST00000594090 MAMLD1Q13495 774 aa15.03■□□□□ -0
VRK3-206ENST00000594090 ZNF234Q14588 700 aa15.03■□□□□ -0
VRK3-206ENST00000594090 E2F5Q15329 346 aa15.03■□□□□ -0
VRK3-206ENST00000594090 FUT11Q495W5 492 aa15.03■□□□□ -0
VRK3-206ENST00000594090 C5orf22Q49AR2 442 aa15.03■□□□□ -0
VRK3-206ENST00000594090 FSCBQ5H9T9 825 aa15.03■□□□□ -0
VRK3-206ENST00000594090 ACBD5Q5T8D3 534 aaPredicted RBP15.03■□□□□ -0
VRK3-206ENST00000594090 MBLAC2Q68D91 279 aa15.03■□□□□ -0
VRK3-206ENST00000594090 PLEKHA7Q6IQ23 1121 aa15.03■□□□□ -0
VRK3-206ENST00000594090 SDE2Q6IQ49 451 aa15.03■□□□□ -0
VRK3-206ENST00000594090 ANO7Q6IWH7 933 aa15.03■□□□□ -0
VRK3-206ENST00000594090 DCUN1D2Q6PH85 259 aa15.03■□□□□ -0
VRK3-206ENST00000594090 C14orf80Q86SX3 495 aa15.03■□□□□ -0
VRK3-206ENST00000594090 RASSF3Q86WH2 238 aa15.03■□□□□ -0
VRK3-206ENST00000594090 GAS2L3Q86XJ1 694 aa15.03■□□□□ -0
VRK3-206ENST00000594090 CCDC117Q8IWD4 279 aaPredicted RBP15.03■□□□□ -0
VRK3-206ENST00000594090 ZNF683Q8IZ20 524 aa15.03■□□□□ -0
VRK3-206ENST00000594090 CCAR2Q8N163 923 aaKnown RBP15.03■□□□□ -0
VRK3-206ENST00000594090 MDGA1Q8NFP4 955 aa15.03■□□□□ -0
VRK3-206ENST00000594090 SORCS1Q8WY21 1168 aa15.03■□□□□ -0
VRK3-206ENST00000594090 CENPIQ92674 756 aaPredicted RBP15.03■□□□□ -0
VRK3-206ENST00000594090 ZNF653Q96CK0 615 aa15.03■□□□□ -0
VRK3-206ENST00000594090 TRIM11Q96F44 468 aa15.03■□□□□ -0
VRK3-206ENST00000594090 C1orf74Q96LT6 269 aa15.03■□□□□ -0
VRK3-206ENST00000594090 HAPLN3Q96S86 360 aa15.03■□□□□ -0
VRK3-206ENST00000594090 DNAJC7Q99615 494 aa15.03■□□□□ -0
VRK3-206ENST00000594090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
VRK3-206ENST00000594090 TRIM5Q9C035 493 aa15.03■□□□□ -0
VRK3-206ENST00000594090 THAP10Q9P2Z0 257 aaPredicted RBP15.03■□□□□ -0
VRK3-206ENST00000594090 SNX10Q9Y5X0 201 aa15.03■□□□□ -0
VRK3-206ENST00000594090 STON1Q9Y6Q2 735 aa15.03■□□□□ -0
VRK3-206ENST00000594090 MYO18AQ92614 2054 aaKnown RBP15.03■□□□□ -0
VRK3-206ENST00000594090 A0A087X0T9 212 aa15.02■□□□□ -0
VRK3-206ENST00000594090 A0A1W2PQF6 199 aa15.02■□□□□ -0
VRK3-206ENST00000594090 TCRBV21S2A2A0A5A6 115 aa15.02■□□□□ -0
VRK3-206ENST00000594090 PRR23AA6NEV1 266 aa15.02■□□□□ -0
VRK3-206ENST00000594090 MFAP3LO75121 409 aa15.02■□□□□ -0
VRK3-206ENST00000594090 ALDH1A2O94788 518 aa15.02■□□□□ -0
VRK3-206ENST00000594090 FAM228BP0C875 321 aa15.02■□□□□ -0
VRK3-206ENST00000594090 MYBL1P10243 752 aa15.02■□□□□ -0
VRK3-206ENST00000594090 IL12RB1P42701 662 aa15.02■□□□□ -0
VRK3-206ENST00000594090 SRSF5Q13243 272 aaKnown RBP15.02■□□□□ -0
VRK3-206ENST00000594090 ENPP2Q13822 863 aa15.02■□□□□ -0
VRK3-206ENST00000594090 ARID5BQ14865 1188 aa15.02■□□□□ -0
VRK3-206ENST00000594090 CXorf57Q6NSI4 855 aaKnown RBP15.02■□□□□ -0
VRK3-206ENST00000594090 DRC7Q8IY82 874 aa15.02■□□□□ -0
VRK3-206ENST00000594090 OR8K1Q8NGG5 319 aa15.02■□□□□ -0
VRK3-206ENST00000594090 CYB5D2Q8WUJ1 264 aa15.02■□□□□ -0
VRK3-206ENST00000594090 EPC1Q9H2F5 836 aa15.02■□□□□ -0
VRK3-206ENST00000594090 CD248Q9HCU0 757 aa15.02■□□□□ -0
VRK3-206ENST00000594090 CNOT8Q9UFF9 292 aaKnown RBP15.02■□□□□ -0
VRK3-206ENST00000594090 INTS6Q9UL03 887 aaKnown RBP15.02■□□□□ -0
VRK3-206ENST00000594090 USP34Q70CQ2 3546 aa15.02□□□□□ -0.01
VRK3-206ENST00000594090 WASH3PC4AMC7 463 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 HRO43593 1189 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 LMNAP02545 664 aaKnown RBP15.01□□□□□ -0.01
VRK3-206ENST00000594090 POLR2EP19388 210 aaKnown RBP15.01□□□□□ -0.01
VRK3-206ENST00000594090 PRKCHP24723 683 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 CNR2P34972 360 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 MRE11P49959 708 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 OGDHQ02218 1023 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 ARL13BQ3SXY8 428 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 ARTNQ5T4W7 220 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 KIAA1211LQ6NV74 962 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 LRRC31Q6UY01 552 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 ASCL5Q7RTU5 278 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 CNPY3Q9BT09 278 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 TPSD1Q9BZJ3 242 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 ABHD10Q9NUJ1 306 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 KIAA1522Q9P206 1035 aaPredicted RBP15.01□□□□□ -0.01
VRK3-206ENST00000594090 RAD54BQ9Y620 910 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 SCINQ9Y6U3 715 aa15.01□□□□□ -0.01
VRK3-206ENST00000594090 IGLV3-10A0A075B6K4 115 aa15□□□□□ -0.01
VRK3-206ENST00000594090 E9PAM4 449 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms