RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DQX1Q8TE96 717 aaKnown RBP16.97■□□□□ 0.31
LIG1-205ENST00000593425 AZIN2Q96A70 460 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 SLC6A18Q96N87 628 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
LIG1-205ENST00000593425 EBF2Q9HAK2 575 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 RAXQ9Y2V3 346 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 COL5A1P20908 1838 aaPredicted RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 FAM149AA5PLN7 773 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 FAM47DPA6NHR8 397 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 PCDHGA12O60330 932 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 CTSOP43234 321 aaPredicted RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 GRK6P43250 576 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ST8SIA6P61647 398 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ACAP1Q15027 740 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 HNRNPA1L2Q32P51 320 aaKnown RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 USP30Q70CQ3 517 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ADAT2Q7Z6V5 191 aaKnown RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 PDZD3Q86UT5 571 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 CFAP52Q8N1V2 620 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 CARNMT1Q8N4J0 409 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ZNF557Q8N988 423 aaPredicted RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 LMO3Q8TAP4 145 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 ADAM32Q8TC27 787 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 GANCQ8TET4 914 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 SLC39A13Q96H72 371 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 HSFY1Q96LI6 401 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 FBXL12Q9NXK8 326 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 XPO7Q9UIA9 1087 aaKnown RBP16.96■□□□□ 0.31
LIG1-205ENST00000593425 NAALADL1Q9UQQ1 740 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 NCKAP1Q9Y2A7 1128 aa16.96■□□□□ 0.31
LIG1-205ENST00000593425 A0A1W2PP55 124 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 A0A1W2PPC4 97 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 MID1O15344 667 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 TNFSF14O43557 240 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 FBXO21O94952 628 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 MOCS2O96007 188 aaPredicted RBP16.95■□□□□ 0.3
LIG1-205ENST00000593425 ASLP04424 464 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 WNT1P04628 370 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
LIG1-205ENST00000593425 GALCP54803 685 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 CAMK2BQ13554 666 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 STILQ15468 1287 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 CST6Q15828 149 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 CCDC157Q569K6 752 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 MS4A13Q5J8X5 152 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 PITRM1Q5JRX3 1037 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 NCEH1Q6PIU2 408 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 SERPINB11Q96P15 392 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 METTL14Q9HCE5 456 aaKnown RBP16.95■□□□□ 0.3
LIG1-205ENST00000593425 SCML1Q9UN30 329 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 ERVW-1Q9UQF0 538 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 TLR6Q9Y2C9 796 aa16.95■□□□□ 0.3
LIG1-205ENST00000593425 A0A1B0GTQ1 180 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 TYW5A2RUC4 315 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 TTC34A8MYJ7 566 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 C10orf142B7Z368 130 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 VILLO15195 856 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 PMM2O15305 246 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 PAPSS1O43252 624 aaPredicted RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 LUC7L3O95232 432 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 RACK1P63244 317 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 CDH18Q13634 790 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 DCAF6Q58WW2 860 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 PRAMEF14Q5SWL7 426 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 C9orf64Q5T6V5 341 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 SYPL2Q5VXT5 272 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 TAC4Q86UU9 113 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 GATAD2AQ86YP4 633 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 MMAAQ8IVH4 418 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 SCUBE3Q8IX30 993 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 GALNT15Q8N3T1 639 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 HNRNPLLQ8WVV9 542 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 DDX50Q9BQ39 737 aaKnown RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 ACE2Q9BYF1 805 aaPredicted RBP16.94■□□□□ 0.3
LIG1-205ENST00000593425 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 DKK4Q9UBT3 224 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 ITIH6Q6UXX5 1313 aa16.94■□□□□ 0.3
LIG1-205ENST00000593425 LAMA5O15230 3695 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 BAHCC1Q9P281 2608 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 TRABD2BA6NFA1 517 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 PSMA7O14818 248 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 WNT9AO14904 365 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
LIG1-205ENST00000593425 RNASEH2AO75792 299 aaKnown RBP16.93■□□□□ 0.3
LIG1-205ENST00000593425 SMC2O95347 1197 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 GPD2P43304 727 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 NUMBP49757 651 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 C21orf59P57076 290 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 CYP4F3Q08477 520 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 NNTQ13423 1086 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 KCNJ12Q14500 433 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 SMAD1Q15797 465 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms