RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RAD54L2Q9Y4B4 1467 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 NISCHQ9Y2I1 1504 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3KA0A087X1G2 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 SLC22A23A1A5C7 686 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3BA6NDS4 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 HMX3A6NHT5 357 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 EFCAB8A8MWE9 144 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 KCNU1A8MYU2 1149 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 MPHOSPH10O00566 681 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TP73O15350 636 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 INPPL1O15357 1258 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 KIF1CO43896 1103 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 BCAR3O75815 825 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 PLAUP00749 431 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 ALDOAP04075 364 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 ENO1P06733 434 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 HOXA7P31268 230 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 GRK6P43250 576 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TLE3Q04726 772 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 POSTNQ15063 836 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 CDC37Q16543 378 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 GALNTL6Q49A17 601 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 ANO1Q5XXA6 986 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 ZNF626Q68DY1 528 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 DHRS13Q6UX07 377 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 SLC39A5Q6ZMH5 540 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 RBM44Q6ZP01 1051 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 GET4Q7L5D6 327 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 NKAPQ8N5F7 415 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 SRFBP1Q8NEF9 429 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 CLEC4CQ8WTT0 213 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 TRAPPC12Q8WVT3 735 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 CCT6BQ92526 530 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 C3orf49Q96BT1 292 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 ZNF830Q96NB3 372 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TRAPPC9Q96Q05 1148 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 PAGR1Q9BTK6 254 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 DDX23Q9BUQ8 820 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TRIM2Q9C040 744 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 PRSS22Q9GZN4 317 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 MYLK2Q9H1R3 596 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 LIN7CQ9NUP9 197 aaKnown RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 TMEM51Q9NW97 253 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 PNMA2Q9UL42 364 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 C19orf53Q9UNZ5 99 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 KNSTRNQ9Y448 316 aa3.88□□□□□ -1.79
VMP1-212ENST00000591782 MORC2Q9Y6X9 1032 aaPredicted RBP3.88□□□□□ -1.79
VMP1-212ENST00000591782 CYP2D7A0A087X1C5 515 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 AGAP5A6NIR3 686 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 C3orf70A6NLC5 250 aaPredicted RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 EPB41L2O43491 1005 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 PIP5K1CO60331 668 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 HMMRO75330 724 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 CNTN5O94779 1100 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 HEXIM1O94992 359 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 CYP3A4P08684 503 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 RFPL3SP0C7P2 107 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 IGFBP2P18065 325 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 SCP2P22307 547 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 SERPINA4P29622 427 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 CASQ1P31415 396 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 HALP42357 657 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 SOX2P48431 317 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 PRKAA2P54646 552 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 HMGN5P82970 282 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 SHC2P98077 582 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 GHRHRQ02643 423 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 PRKG1Q13976 671 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 GLE1Q53GS7 698 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 MTX3Q5HYI7 312 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 RHPN2Q8IUC4 686 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 UEVLDQ8IX04 471 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 ADGRF3Q8IZF5 1079 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 GALNT15Q8N3T1 639 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 LSM14AQ8ND56 463 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 CPT1BQ92523 772 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 RUBCNQ92622 972 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 ABHD14AQ9BUJ0 271 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 NRIP3Q9NQ35 241 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 KCND3Q9UK17 655 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 PCDHA10Q9Y5I2 948 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 COPG1Q9Y678 874 aaKnown RBP3.87□□□□□ -1.79
VMP1-212ENST00000591782 SPATA31A5Q5VU36 1347 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 SPATA31A7Q8IWB4 1347 aa3.87□□□□□ -1.79
VMP1-212ENST00000591782 CYP3A7-CYP3A51PA0A087WV96 503 aa3.86□□□□□ -1.79
VMP1-212ENST00000591782 BICDL2A1A5D9 508 aa3.86□□□□□ -1.79
VMP1-212ENST00000591782 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
VMP1-212ENST00000591782 MBD3L5A6NJ08 208 aaPredicted RBP3.86□□□□□ -1.79
VMP1-212ENST00000591782 E5RJQ4 531 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms