RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ACOT9Q9Y305 439 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 RRM2P31350 389 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PSEN1P49768 467 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MTDHQ86UE4 582 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CCDC103Q8IW40 242 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.6□□□□□ -0.231e-5■■□□□ 13.3
SMARCA4-216ENST00000591545 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 WDR41Q9HAD4 459 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SNX13Q9Y5W8 968 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 H3BQF6 201 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MICAL2O94851 1124 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CXCL14O95715 111 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MLNP12872 115 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SERPINB5P36952 375 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 POLR2LP62875 67 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PPP1R16AQ96I34 528 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MAGED4Q96JG8 741 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 KCNMB3Q9NPA1 279 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SKAP2O75563 359 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 HDCP19113 662 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CYP3A7P24462 503 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PBLDP30039 288 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 NAB1Q13506 487 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 NFYCQ13952 458 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 COL9A3Q14050 684 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 WSCD1Q658N2 575 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PDPK2PQ6A1A2 396 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 VCPIP1Q96JH7 1222 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 DIABLOQ9NR28 239 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 DLGAP3O95886 979 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CHKAP35790 457 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CCDC153Q494R4 210 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 IZUMO2Q6UXV1 221 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 TFAP2DQ7Z6R9 452 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 ZFRQ96KR1 1074 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PACSIN1Q9BY11 444 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 POPDC2Q9HBU9 364 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SPASTQ9UBP0 616 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 TMCC3Q9ULS5 477 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 LRCH1Q9Y2L9 728 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 RIPK2O43353 540 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 EIF2S1P05198 315 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 TCF3P15923 654 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 TRIP4Q15650 581 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 LENG9Q96B70 501 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SGF29Q96ES7 293 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 DYRK1BQ9Y463 629 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 DUSP10Q9Y6W6 482 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 GLUD1P00367 558 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 FAM58BPP0C7Q3 252 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 OASLQ15646 514 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 NT5DC1Q5TFE4 455 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 C11orf96Q7Z7L8 435 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 DEFB106AQ8N104 65 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 LPCAT1Q8NF37 534 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 OSCP1Q8WVF1 389 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SEPT4O43236 478 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 AP5Z1O43299 807 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 NDUFS2O75306 463 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SERPINE1P05121 402 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MSH3P20585 1137 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 CYP2F1P24903 491 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 CDH8P55286 799 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 TGM3Q08188 693 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 PRKAA1Q13131 559 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MPP3Q13368 585 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 LLGL2Q6P1M3 1020 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF438Q7Z4V0 828 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 CYP4Z1Q86W10 505 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 KYQ8NBH2 561 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 PGM2Q96G03 612 aa13.59□□□□□ -0.23
SMARCA4-216ENST00000591545 MRPL48Q96GC5 212 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms