RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 CASP5P51878 434 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 COPB1P53618 953 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 PEX3P56589 373 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 SP3Q02447 781 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 DMP1Q13316 513 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 KRT31Q15323 416 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 NFIL3Q16649 462 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 APTXQ7Z2E3 356 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 ZC3H3Q8IXZ2 948 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 C3orf20Q8ND61 904 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 OR6J1Q8NGC5 347 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 GOLGA5Q8TBA6 731 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 HOXB13Q92826 284 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 CNOT6LQ96LI5 555 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 ACCSQ96QU6 501 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 SH2D3AQ9BRG2 576 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 NTPCRQ9BSD7 190 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 SARGQ9BW04 601 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 STRA6Q9BX79 667 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 DHX33Q9H6R0 707 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 LDAHQ9H6V9 325 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 TRPS1Q9UHF7 1281 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 STXBP5LQ9Y2K9 1186 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 Q9Y3F1 56 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 PCDHB1Q9Y5F3 818 aa8.38□□□□□ -1.07
NEDD4L-230ENST00000590638 CASP8AP2Q9UKL3 1982 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 LGALS2P05162 132 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 MMP3P08254 477 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 HOXD10P28358 340 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 CTGFP29279 349 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 HOXD13P35453 343 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 MTIF2P46199 727 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 GSDMDP57764 484 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 RAC3P60763 192 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 GTF2BQ00403 316 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 MYBPC2Q14324 1141 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 EMC2Q15006 297 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 ACAP1Q15027 740 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 BRD3Q15059 726 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 CCL14Q16627 93 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 ZC2HC1CQ53FD0 456 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 ZNF484Q5JVG2 852 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 OVCH2Q7RTZ1 564 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 HAUS6Q7Z4H7 955 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 VSTM4Q8IW00 320 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 SYCP3Q8IZU3 236 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 TP53I13Q8NBR0 393 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 AFG1LQ8WV93 481 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 TCP11Q8WWU5 503 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 MTFMTQ96DP5 389 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 TUBGCP2Q9BSJ2 902 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 POLR3FQ9H1D9 316 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 VPS16Q9H269 839 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 XPNPEP1Q9NQW7 623 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 TAB2Q9NYJ8 693 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 FLRT1Q9NZU1 646 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 AJAP1Q9UKB5 411 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 ZNF215Q9UL58 517 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 EXOC7Q9UPT5 735 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 NR2E3Q9Y5X4 410 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 KAT6AQ92794 2004 aa8.37□□□□□ -1.07
NEDD4L-230ENST00000590638 COL1A2P08123 1366 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 LGALS16A8MUM7 142 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 SLC16A4O15374 487 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 MAGEB2O15479 319 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 TGFB1I1O43294 461 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 GPR32O75388 356 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 TUSC2O75896 110 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 NR2F2P24468 414 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 MARK3P27448 753 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 ARL2P36404 184 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 CASRP41180 1078 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 NAMPTP43490 491 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 NPTX2P47972 431 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 SLC6A9P48067 706 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 MAP2K6P52564 334 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 DSC2Q02487 901 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 RAB39AQ14964 217 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 ARHGEF6Q15052 776 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 ZNF124Q15973 351 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 TBR1Q16650 682 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 CCDC40Q4G0X9 1142 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 PRAMEF19Q5SWL8 479 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 SPECC1LQ69YQ0 1117 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 LRRC55Q6ZSA7 311 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 CHST15Q7LFX5 561 aaPredicted RBP8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 CCDC186Q7Z3E2 898 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 FRMD5Q7Z6J6 570 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 CMTM4Q8IZR5 234 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 MDM1Q8TC05 714 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 TMEM174Q8WUU8 243 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 ARL8AQ96BM9 186 aa8.36□□□□□ -1.07
NEDD4L-230ENST00000590638 MBD6Q96DN6 1003 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms