RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IMPG2Q9BZV3 1241 aa18.04■□□□□ 0.48
RETREG3-210ENST00000590541 FBXL12Q9NXK8 326 aa18.04■□□□□ 0.48
RETREG3-210ENST00000590541 SCML1Q9UN30 329 aa18.04■□□□□ 0.48
RETREG3-210ENST00000590541 YKT6O15498 198 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 SMC2O95347 1197 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 ATP5BP06576 529 aaKnown RBP18.03■□□□□ 0.48
RETREG3-210ENST00000590541 CD38P28907 300 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 CD70P32970 193 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 HARS2P49590 506 aaKnown RBP18.03■□□□□ 0.48
RETREG3-210ENST00000590541 ZNF445P59923 1031 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 MCCD1P59942 119 aaPredicted RBP18.03■□□□□ 0.48
RETREG3-210ENST00000590541 BNIP3Q12983 259 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 TBC1D25Q3MII6 688 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 SFMBT2Q5VUG0 894 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 ELOA2Q8IYF1 753 aaPredicted RBP18.03■□□□□ 0.48
RETREG3-210ENST00000590541 FAM186BQ8IYM0 893 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 CACTIN-AS1Q8N1I8 211 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 GANCQ8TET4 914 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 NDRG1Q92597 394 aaKnown RBP18.03■□□□□ 0.48
RETREG3-210ENST00000590541 DNAI2Q9GZS0 605 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 NEUROG2Q9H2A3 272 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 GDF3Q9NR23 364 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 AASDHPPTQ9NRN7 309 aa18.03■□□□□ 0.48
RETREG3-210ENST00000590541 A0A1W2PP55 124 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 CAPN8A6NHC0 703 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 ERVH48-1M5A8F1 160 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 POLR2EP19388 210 aaKnown RBP18.02■□□□□ 0.48
RETREG3-210ENST00000590541 GTF2H1P32780 548 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 ACTN2P35609 894 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 TKTL1P51854 596 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 NXPH1P58417 271 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 ILKQ13418 452 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 ZCWPW2Q504Y3 356 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 ADGRF1Q5T601 910 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 PM20D1Q6GTS8 502 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 KANSL1Q7Z3B3 1105 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 TAS1R2Q8TE23 839 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 HEXIM2Q96MH2 286 aaKnown RBP18.02■□□□□ 0.48
RETREG3-210ENST00000590541 NIF3L1Q9GZT8 377 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 SFMBT1Q9UHJ3 866 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 MAPK8IP1Q9UQF2 711 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 HBS1LQ9Y450 684 aaKnown RBP18.02■□□□□ 0.48
RETREG3-210ENST00000590541 MGAQ8IWI9 3026 aa18.02■□□□□ 0.48
RETREG3-210ENST00000590541 MAST4O15021 2626 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 MID1O15344 667 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 STX10O60499 249 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 SIN3BO75182 1162 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 LATS1O95835 1130 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 ZBED1O96006 694 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 CKMT2P17540 419 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 GLDCP23378 1020 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 ARRB1P49407 418 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-210ENST00000590541 INSM1Q01101 510 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-210ENST00000590541 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 ZNF658Q5TYW1 1059 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-210ENST00000590541 DCBLD1Q8N8Z6 715 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 CCDC150Q8NCX0 1101 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 OR2T34Q8NGX1 318 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 LMLNQ96KR4 655 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 ULBP1Q9BZM6 244 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 OLA1Q9NTK5 396 aaKnown RBP18.01■□□□□ 0.47
RETREG3-210ENST00000590541 ADAMTS1Q9UHI8 967 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 CLCA2Q9UQC9 943 aa18.01■□□□□ 0.47
RETREG3-210ENST00000590541 LRRC72A6NJI9 287 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 TLR4O00206 839 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 TULP2O00295 520 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 CETN3O15182 167 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 RXRGP48443 463 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 GCLMP48507 274 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 CCR5P51681 352 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 PPP3CAQ08209 521 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 PNOCQ13519 176 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 CST6Q15828 149 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 HNRNPA1L2Q32P51 320 aaKnown RBP18■□□□□ 0.47
RETREG3-210ENST00000590541 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
RETREG3-210ENST00000590541 SLC4A11Q8NBS3 891 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 TTC17Q96AE7 1141 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 MRGPRX3Q96LB0 322 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 TSG101Q99816 390 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 ERVMER34-1Q9H9K5 563 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 ATMQ13315 3056 aa18■□□□□ 0.47
RETREG3-210ENST00000590541 MSI1O43347 362 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 RNASEH2AO75792 299 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 EPB41P11171 864 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 ACP1P24666 158 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 PPP1R2P41236 205 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 TAF1BQ53T94 588 aaPredicted RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 MPP7Q5T2T1 576 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 PIK3R6Q5UE93 754 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 ARHGAP17Q68EM7 881 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 RFWD3Q6PCD5 774 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 SPATS2Q86XZ4 545 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 MMAAQ8IVH4 418 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 ANKRD52Q8NB46 1076 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 EDEM1Q92611 657 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms