RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
MBD3-206ENST00000589901 TLR6Q9Y2C9 796 aa16.89■□□□□ 0.29
MBD3-206ENST00000589901 SNX11Q9Y5W9 270 aa16.89■□□□□ 0.29
MBD3-206ENST00000589901 BICDL2A1A5D9 508 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 TAF4O00268 1085 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 KCNK3O14649 394 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 CAPNS1P04632 268 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 KRT5P13647 590 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 MORC3Q14149 939 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 TTC31Q49AM3 519 aaPredicted RBP16.88■□□□□ 0.29
MBD3-206ENST00000589901 MS4A13Q5J8X5 152 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 DBX2Q6ZNG2 339 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 GLRX5Q86SX6 157 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 TAC4Q86UU9 113 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 ZNF557Q8N988 423 aaPredicted RBP16.88■□□□□ 0.29
MBD3-206ENST00000589901 MRGPRX3Q96LB0 322 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
MBD3-206ENST00000589901 RSPH9Q9H1X1 276 aaPredicted RBP16.88■□□□□ 0.29
MBD3-206ENST00000589901 CNTN6Q9UQ52 1028 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 APOBEC2Q9Y235 224 aaKnown RBP16.88■□□□□ 0.29
MBD3-206ENST00000589901 ANKRD6Q9Y2G4 727 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.29
MBD3-206ENST00000589901 LAMA5O15230 3695 aa16.88■□□□□ 0.29
MBD3-206ENST00000589901 NUMA1Q14980 2115 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 TYW5A2RUC4 315 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 SIN3BO75182 1162 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 AFPP02771 609 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 CD27P26842 260 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 ANP32AP39687 249 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 CTSOP43234 321 aaPredicted RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 ST8SIA6P61647 398 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 NNTQ13423 1086 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 CDH18Q13634 790 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 HNRNPA1L2Q32P51 320 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 DCAF6Q58WW2 860 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 KCNT1Q5JUK3 1230 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 FOXR2Q6PJQ5 311 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 DHX40Q8IX18 779 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 BAHD1Q8TBE0 780 aaPredicted RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 RHBDD1Q8TEB9 315 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 GANCQ8TET4 914 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 ORAI3Q9BRQ5 295 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 SRRTQ9BXP5 876 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 PABPC3Q9H361 631 aaKnown RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 SGK2Q9HBY8 427 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 UBE2TQ9NPD8 197 aaPredicted RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 OSGEPQ9NPF4 335 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 ACP6Q9NPH0 428 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 SERGEFQ9UGK8 458 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 CYTH4Q9UIA0 394 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 BTBD3Q9Y2F9 522 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 PCDHGB2Q9Y5G2 931 aa16.87■□□□□ 0.29
MBD3-206ENST00000589901 ANKRD11Q6UB99 2663 aaPredicted RBP16.87■□□□□ 0.29
MBD3-206ENST00000589901 FAM47DPA6NHR8 397 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 TTC34A8MYJ7 566 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 E5RJQ4 531 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 CAPN9O14815 690 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 FLRT2O43155 660 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 SART1O43290 800 aaKnown RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 GADD45BO75293 160 aaPredicted RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 LETM1O95202 739 aaPredicted RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 LUC7L3O95232 432 aaKnown RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 GNA14O95837 355 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 ASLP04424 464 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 IGHV4-34P06331 123 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 ACADSBP45954 432 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 GRIA4P48058 902 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 NUMBP49757 651 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 PITX1P78337 314 aaPredicted RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 SCAPQ12770 1279 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 PAK1Q13153 545 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 TEAD4Q15561 434 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
MBD3-206ENST00000589901 C9orf64Q5T6V5 341 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 RAP1GAP2Q684P5 730 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 LGI2Q8N0V4 545 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 SLC4A5Q9BY07 1137 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 TOR4AQ9NXH8 423 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 FBXL12Q9NXK8 326 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 ERVW-1Q9UQF0 538 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 NCKAP1Q9Y2A7 1128 aa16.86■□□□□ 0.29
MBD3-206ENST00000589901 MID1O15344 667 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 ATXN1LP0C7T5 689 aaKnown RBP16.85■□□□□ 0.29
MBD3-206ENST00000589901 TAF5Q15542 800 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 CST6Q15828 149 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 KIAA0895LQ68EN5 471 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 GJB7Q6PEY0 223 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
MBD3-206ENST00000589901 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 BEND5Q7L4P6 421 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 MMAAQ8IVH4 418 aaKnown RBP16.85■□□□□ 0.29
MBD3-206ENST00000589901 CCDC117Q8IWD4 279 aaPredicted RBP16.85■□□□□ 0.29
MBD3-206ENST00000589901 APCDD1Q8J025 514 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 STK32AQ8WU08 396 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 TJP2Q9UDY2 1190 aa16.85■□□□□ 0.29
MBD3-206ENST00000589901 SLCO3A1Q9UIG8 710 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms