RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 CCDC39Q9UFE4 941 aa8.29□□□□□ -1.08
VAT1-207ENST00000589828 INTS6Q9UL03 887 aaKnown RBP8.29□□□□□ -1.08
VAT1-207ENST00000589828 CA5BQ9Y2D0 317 aa8.29□□□□□ -1.08
VAT1-207ENST00000589828 U3KQA8 63 aa8.29□□□□□ -1.08
VAT1-207ENST00000589828 EIF3DO15371 548 aaKnown RBP eCLIP8.28□□□□□ -1.08
VAT1-207ENST00000589828 LATO43561 262 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 KIF20AO95235 890 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 ITGB6P18564 788 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 SLC8A1P32418 973 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 METAP1P53582 386 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 ADPRHP54922 357 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 DLG4P78352 724 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 CLDN10P78369 228 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 HNRNPA1L2Q32P51 320 aaKnown RBP8.28□□□□□ -1.08
VAT1-207ENST00000589828 NAPEPLDQ6IQ20 393 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 BHLHA9Q7RTU4 235 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 TADA2BQ86TJ2 420 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 UNC93AQ86WB7 457 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 CCDC65Q8IXS2 484 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 LSMEM2Q8N112 164 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 AHI1Q8N157 1196 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 OXR1Q8N573 874 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 MFSD2AQ8NA29 543 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 OR14C36Q8NHC7 312 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 PARD3BQ8TEW8 1205 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 MYEOVQ96EZ4 313 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 DEPDC7Q96QD5 511 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 DUSP16Q9BY84 665 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 OSBPL2Q9H1P3 480 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 STOML2Q9UJZ1 356 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 SCML1Q9UN30 329 aa8.28□□□□□ -1.08
VAT1-207ENST00000589828 SRPRBQ9Y5M8 271 aaKnown RBP8.28□□□□□ -1.08
VAT1-207ENST00000589828 HEMK1Q9Y5R4 338 aaPredicted RBP8.28□□□□□ -1.08
VAT1-207ENST00000589828 GOLGA6L7A0A1B0GV03 622 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 TTC34A8MYJ7 566 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 FFAR2O15552 330 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 CLSTN1O94985 981 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 ATP5BP06576 529 aaKnown RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 CKMT1AP12532 417 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 POLR2EP19388 210 aaKnown RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 DGKAP23743 735 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 MAT2AP31153 395 aaKnown RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 DRD3P35462 400 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 STAT6P42226 847 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 PSMD8P48556 350 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 DAB2P98082 770 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 INCA1Q0VD86 236 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 CLN3Q13286 438 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 ARL13BQ3SXY8 428 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 C3orf38Q5JPI3 329 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 RFWD3Q6PCD5 774 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 IGF2-ASQ6U949 168 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 STXBP4Q6ZWJ1 553 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 STK40Q8N2I9 435 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 OR4C6Q8NH72 309 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 TTC17Q96AE7 1141 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 SLC46A1Q96NT5 459 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 CDK5RAP1Q96SZ6 601 aaKnown RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 OMDQ99983 421 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 APOBEC3GQ9HC16 384 aaKnown RBP8.27□□□□□ -1.09
VAT1-207ENST00000589828 THSD1Q9NS62 852 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 STARD5Q9NSY2 213 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 SFMBT1Q9UHJ3 866 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 STRIP2Q9ULQ0 834 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 FZD4Q9ULV1 537 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 SATB2Q9UPW6 733 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 PTPN13Q12923 2485 aa8.27□□□□□ -1.09
VAT1-207ENST00000589828 ARID1BQ8NFD5 2236 aaPredicted RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3DA0A087WVF3 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3IA0A087WXS9 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3EA0A087X179 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3KA0A087X1G2 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3FA6NER0 549 aaPredicted RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 CDRT15L2A8MXV6 281 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3LB9A6J9 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TULP2O00295 520 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 CASC3O15234 703 aaKnown RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 MSI1O43347 362 aaKnown RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 SUV39H1O43463 412 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 STX6O43752 255 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 LZTS3O60299 673 aaPredicted RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBL1XO60907 577 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 CD2BP2O95400 341 aaKnown RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 ASS1P00966 412 aaKnown RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 NTRK1P04629 796 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TBC1D3HP0C7X1 549 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 GOT1P17174 413 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 TGM2P21980 687 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 SLC6A4P31645 630 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 CSKP41240 450 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 YWHAGP61981 247 aaKnown RBP eCLIP8.26□□□□□ -1.09
VAT1-207ENST00000589828 SRSF6Q13247 344 aaKnown RBP8.26□□□□□ -1.09
VAT1-207ENST00000589828 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
VAT1-207ENST00000589828 ISXQ2M1V0 245 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms