RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 KIAA1522Q9P206 1035 aaPredicted RBP14.87□□□□□ -0.03
MBD1-220ENST00000589758 CYTH4Q9UIA0 394 aa14.87□□□□□ -0.03
MBD1-220ENST00000589758 SCML1Q9UN30 329 aa14.87□□□□□ -0.03
MBD1-220ENST00000589758 PCDHGC3Q9UN70 934 aa14.87□□□□□ -0.03
MBD1-220ENST00000589758 WASF3Q9UPY6 502 aa14.87□□□□□ -0.03
MBD1-220ENST00000589758 CACNA1BQ00975 2339 aa14.87□□□□□ -0.03
MBD1-220ENST00000589758 KMT2BQ9UMN6 2715 aaPredicted RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 H0Y626 953 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 RNASEH1O60930 286 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 GJB3O75712 270 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 LUC7L3O95232 432 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 TRIM16O95361 564 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 IGLV3-25P01717 112 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 SRPRAP08240 638 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 SLC2A3P11169 496 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 TACR2P21452 398 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 PON1P27169 355 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 CSKP41240 450 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 SIM1P81133 766 aaPredicted RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 CDK17Q00537 523 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 MTA1Q13330 715 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 ARID5BQ14865 1188 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 MAN2A1Q16706 1144 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 ZC3H12AQ5D1E8 599 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 EFHC1Q5JVL4 640 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 ZNF776Q68DI1 518 aaPredicted RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 IRF2BP1Q8IU81 584 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 LGI2Q8N0V4 545 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 CFAP52Q8N1V2 620 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 OR2I1PQ8NGU4 316 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 RSPH9Q9H1X1 276 aaPredicted RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 SGK2Q9HBY8 427 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 ASNSD1Q9NWL6 643 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 NCKAP1Q9Y2A7 1128 aa14.86□□□□□ -0.03
MBD1-220ENST00000589758 TPRP12270 2363 aaKnown RBP14.86□□□□□ -0.03
MBD1-220ENST00000589758 ACACBO00763 2458 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 KCNU1A8MYU2 1149 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 F5H5T6 163 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 HSF2BPO75031 334 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 SEMA4FO95754 770 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 CER1O95813 267 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 PROS1P07225 676 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 ZNF883P0CG24 379 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 PTMSP20962 102 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 ABCB4P21439 1286 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 CCR1P32246 355 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 ACSL1P33121 698 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 KRT9P35527 623 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 TYRO3Q06418 890 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 EIF4EBP2Q13542 120 aaPredicted RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 SLC12A1Q13621 1099 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 KLHL40Q2TBA0 621 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 HNRNPA1L2Q32P51 320 aaKnown RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 TTC39BQ5VTQ0 682 aaPredicted RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 RAP1GAP2Q684P5 730 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 USP30Q70CQ3 517 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 CHSY1Q86X52 802 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 MYEOVQ96EZ4 313 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 MYO19Q96H55 970 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 SLC2A13Q96QE2 648 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 ADAM33Q9BZ11 813 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 C6orf106Q9H6K1 298 aaPredicted RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 OSGEPQ9NPF4 335 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 DNAJC12Q9UKB3 198 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 INTS6Q9UL03 887 aaKnown RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 ERVW-1Q9UQF0 538 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.85□□□□□ -0.03
MBD1-220ENST00000589758 CEP83Q9Y592 693 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 PCDHB9Q9Y5E1 797 aa14.85□□□□□ -0.03
MBD1-220ENST00000589758 SPAARA0A1B0GVQ0 90 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 TARSL2A2RTX5 802 aaKnown RBP14.84□□□□□ -0.03
MBD1-220ENST00000589758 SH3BP5O60239 455 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 KRT37O76014 449 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 MATKP42679 507 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 AFF3P51826 1226 aaKnown RBP14.84□□□□□ -0.03
MBD1-220ENST00000589758 OXCT1P55809 520 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 BPIFB4P59827 614 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 APBA1Q02410 837 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 TEAD4Q15561 434 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 FSCBQ5H9T9 825 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 CT47A1Q5JQC4 288 aaPredicted RBP14.84□□□□□ -0.03
MBD1-220ENST00000589758 PITRM1Q5JRX3 1037 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 RNF219Q5W0B1 726 aaPredicted RBP14.84□□□□□ -0.03
MBD1-220ENST00000589758 UNQ6494/PRO21346Q6UXR6 183 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 DEFB106AQ8N104 65 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 WDTC1Q8N5D0 677 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 C1orf216Q8TAB5 229 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 SNX19Q92543 992 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 RNF34Q969K3 372 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 MRGPRX3Q96LB0 322 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 PPP1R9BQ96SB3 815 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 SCNM1Q9BWG6 230 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 PABPC3Q9H361 631 aaKnown RBP14.84□□□□□ -0.03
MBD1-220ENST00000589758 GAREM1Q9H706 876 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 FAM204AQ9H8W3 233 aa14.84□□□□□ -0.03
MBD1-220ENST00000589758 SIX2Q9NPC8 291 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms