RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 TRIM61Q5EBN2 209 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 WDR45BQ5MNZ6 344 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 SLC23A3Q6PIS1 610 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
NFIC-208ENST00000589537 CADM4Q8NFZ8 388 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 EPS8L1Q8TE68 723 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 CYB5D2Q8WUJ1 264 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 PGAP3Q96FM1 320 aaPredicted RBP17.18■□□□□ 0.34
NFIC-208ENST00000589537 ZNF419Q96HQ0 510 aaPredicted RBP17.18■□□□□ 0.34
NFIC-208ENST00000589537 PRMT1Q99873 361 aaKnown RBP17.18■□□□□ 0.34
NFIC-208ENST00000589537 NUP58Q9BVL2 599 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 PCED1AQ9H1Q7 454 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 SLC6A17Q9H1V8 727 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 GANQ9H2C0 597 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 TMEM9BQ9NQ34 198 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 RXFP3Q9NSD7 469 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.344e-8■■□□□ 13.1
NFIC-208ENST00000589537 SDK1Q7Z5N4 2213 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 DNAH14Q0VDD8 3507 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 CKAP5Q14008 2032 aa17.18■□□□□ 0.34
NFIC-208ENST00000589537 MUC22E2RYF6 1773 aaPredicted RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 ABCA7Q8IZY2 2146 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 A0A1B0GVM2 712 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 MED19A0JLT2 244 aaPredicted RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 TCAF2A6NFQ2 919 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 TM4SF5O14894 197 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 GRAP2O75791 330 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 CDK11BP21127 795 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 ITPKAP23677 461 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 CSKP41240 450 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 TPMTP51580 245 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 COPB1P53618 953 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 POLR2FP61218 127 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 PITX1P78337 314 aaPredicted RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 SFSWAPQ12872 951 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 BRMS1LQ5PSV4 323 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 TRIM72Q6ZMU5 477 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 ARCQ7LC44 396 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 NOP9Q86U38 636 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 CFAP52Q8N1V2 620 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 NUP205Q92621 2012 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 ERLEC1Q96DZ1 483 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 TOE1Q96GM8 510 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 HSPA12BQ96MM6 686 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 SPAG5Q96R06 1193 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 FAM207AQ9NSI2 230 aaPredicted RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 WSB2Q9NYS7 404 aaPredicted RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 XPO7Q9UIA9 1087 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 SCML1Q9UN30 329 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 SLC6A14Q9UN76 642 aa17.17■□□□□ 0.34
NFIC-208ENST00000589537 TNRC6BQ9UPQ9 1833 aaKnown RBP17.17■□□□□ 0.34
NFIC-208ENST00000589537 SYNJ2BP-COX16A0A087WUM0 186 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 LRRC10BA6NIK2 292 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 M0QYT0 321 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 SERPINF2P08697 491 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 HLA-EP13747 358 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 GNSP15586 552 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 SOX5P35711 763 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 STAT1P42224 750 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 JAM2P57087 298 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 NOMO3P69849 1222 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 IRX4P78413 519 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 CDR2Q01850 454 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 SULT2A1Q06520 285 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 NME3Q13232 169 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 TTC31Q49AM3 519 aaPredicted RBP17.16■□□□□ 0.34
NFIC-208ENST00000589537 PPM1JQ5JR12 505 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 PITRM1Q5JRX3 1037 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 FAM102AQ5T9C2 384 aaPredicted RBP17.16■□□□□ 0.34
NFIC-208ENST00000589537 TAF3Q5VWG9 929 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 RNF219Q5W0B1 726 aaPredicted RBP17.16■□□□□ 0.34
NFIC-208ENST00000589537 SLC41A1Q8IVJ1 513 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 MYEOVQ96EZ4 313 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 NPY6RQ99463 290 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 COX16Q9P0S2 106 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
NFIC-208ENST00000589537 C4orf47A7E2U8 309 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 RNASEH1O60930 286 aaKnown RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 CFIP05156 583 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 ZNF18P17022 549 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 NNMTP40261 264 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 SULT1E1P49888 294 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 ATXN3P54252 364 aaPredicted RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 ECT2LQ008S8 904 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 SYCP1Q15431 976 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 HNRNPA1L2Q32P51 320 aaKnown RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 PLEKHG6Q3KR16 790 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 SLC25A52Q3SY17 297 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 XYLT1Q86Y38 959 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 RGL4Q8IZJ4 473 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 CCAR2Q8N163 923 aaKnown RBP17.15■□□□□ 0.34
NFIC-208ENST00000589537 NEK11Q8NG66 645 aa17.15■□□□□ 0.34
NFIC-208ENST00000589537 NT5C3BQ969T7 300 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms