RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 ZNF185O15231 689 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 HOXC11O43248 304 aaPredicted RBP18.19■□□□□ 0.5
DNMT1-215ENST00000588913 TSPAN3O60637 253 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 MOCS3O95396 460 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 COL9A1P20849 921 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 KDSRQ06136 332 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 ANO4Q32M45 955 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 RFWD3Q6PCD5 774 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 DTWD2Q8NBA8 298 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 CD101Q93033 1021 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 NPY6RQ99463 290 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 OSBPL6Q9BZF3 934 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 ZDHHC4Q9NPG8 344 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 HCN2Q9UL51 889 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 CAPN6Q9Y6Q1 641 aa18.19■□□□□ 0.5
DNMT1-215ENST00000588913 NEDD8-MDP1E9PL57 170 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 ATMINO43313 823 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-215ENST00000588913 CORO7P57737 925 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 TCF15Q12870 199 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 SH3PXD2AQ5TCZ1 1133 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
DNMT1-215ENST00000588913 MREGQ8N565 214 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 NT5C3BQ969T7 300 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 MSANTD3Q96H12 275 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 TBCBQ99426 244 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 PIGVQ9NUD9 493 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 ADAM22Q9P0K1 906 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 MARK1Q9P0L2 795 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 STOML2Q9UJZ1 356 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 TLR6Q9Y2C9 796 aa18.18■□□□□ 0.5
DNMT1-215ENST00000588913 K7EQS6 105 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 AGPSO00116 658 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 TULP3O75386 442 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 MOCS2O96007 188 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 ADH1CP00326 375 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 TYRP14679 529 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 TNFAIP3P21580 790 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 MATKP42679 507 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SKOR1P84550 965 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 RING1Q06587 406 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 MTAPQ13126 283 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 ACAD10Q6JQN1 1059 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 ZDHHC17Q8IUH5 632 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 CFAP57Q96MR6 1250 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SERPINB11Q96P15 392 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 BBS2Q9BXC9 721 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 DCLK3Q9C098 648 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 DDIT4Q9NX09 232 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 PENKP01210 267 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 NOS2P35228 1153 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SCNN1AP37088 669 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 NSFP46459 744 aaKnown RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 GAD2Q05329 585 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SLC18A3Q16572 532 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 ARTNQ5T4W7 220 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 EMC10Q5UCC4 262 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 MCOLN2Q8IZK6 566 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 WFDC5Q8TCV5 224 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 NELL2Q99435 816 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 CAPS2Q9BXY5 557 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 CHRDQ9H2X0 955 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 MRPS17Q9Y2R5 130 aaKnown RBP18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SNX10Q9Y5X0 201 aa18.17■□□□□ 0.5
DNMT1-215ENST00000588913 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-215ENST00000588913 KCNU1A8MYU2 1149 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 M0QYT0 321 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 ACSL4O60488 711 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 CISD3P0C7P0 127 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 RRM1P23921 792 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
DNMT1-215ENST00000588913 SULT1E1P49888 294 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 NR1H3Q13133 447 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 NME3Q13232 169 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-215ENST00000588913 PPP1R15BQ5SWA1 713 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 CPXM2Q8N436 756 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 TLR10Q9BXR5 811 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 GDF3Q9NR23 364 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 RSPH14Q9UHP6 348 aa18.16■□□□□ 0.5
DNMT1-215ENST00000588913 ATXN2Q99700 1313 aaKnown RBP18.16■□□□□ 0.5
DNMT1-215ENST00000588913 EBAG9O00559 213 aa18.15■□□□□ 0.5
DNMT1-215ENST00000588913 GALR2O43603 387 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 CACNG3O60359 315 aa18.15■□□□□ 0.5
DNMT1-215ENST00000588913 RFC1P35251 1148 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 RPS9P46781 194 aaKnown RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 IRAK1P51617 712 aa18.15■□□□□ 0.5
DNMT1-215ENST00000588913 NAP1L1P55209 391 aaKnown RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 GSCP56915 257 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 RPL7AP62424 266 aaKnown RBP18.15■□□□□ 0.5
DNMT1-215ENST00000588913 OGDHQ02218 1023 aa18.15■□□□□ 0.5
DNMT1-215ENST00000588913 PIK3R6Q5UE93 754 aa18.15■□□□□ 0.5
DNMT1-215ENST00000588913 TSSK4Q6SA08 328 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1072 ms