RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF883P0CG24 379 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 CTSOP43234 321 aaPredicted RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 GRIA4P48058 902 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 PSMD8P48556 350 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 CCT8P50990 548 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 C21orf59P57076 290 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 NUCB2P80303 420 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 SUZ12Q15022 739 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 RNF219Q5W0B1 726 aaPredicted RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 RAP1GAP2Q684P5 730 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 KIAA0907Q7Z7F0 614 aaPredicted RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 PROSER1Q86XN7 944 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 MARCH9Q86YJ5 346 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 CREBRFQ8IUR6 639 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 MMAAQ8IVH4 418 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 SCUBE3Q8IX30 993 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 LGI2Q8N0V4 545 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 ZNF557Q8N988 423 aaPredicted RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 HSFY1Q96LI6 401 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 SLC6A18Q96N87 628 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 OMDQ99983 421 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 GTPBP4Q9BZE4 634 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 PABPC3Q9H361 631 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 CCDC86Q9H6F5 360 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 SGK2Q9HBY8 427 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 FBXL12Q9NXK8 326 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 COX16Q9P0S2 106 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 TJP2Q9UDY2 1190 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 SERGEFQ9UGK8 458 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 XPO7Q9UIA9 1087 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 CHD6Q8TD26 2715 aa14.21□□□□□ -0.14
HDAC5-208ENST00000588419 MYLKQ15746 1914 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 BICDL2A1A5D9 508 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 TTC34A8MYJ7 566 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 H0Y8X5 98 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 TAF4O00268 1085 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 THAP12O43422 761 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 RNASEH2AO75792 299 aaKnown RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 LUC7L3O95232 432 aaKnown RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 MOCS3O95396 460 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 ASLP04424 464 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 CD27P26842 260 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 ZBTB16Q05516 673 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 DCAF6Q58WW2 860 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 FSCBQ5H9T9 825 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 MS4A13Q5J8X5 152 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 PITRM1Q5JRX3 1037 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 MPP7Q5T2T1 576 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 KIAA0895LQ68EN5 471 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 DENND1BQ6P3S1 775 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 CIR1Q86X95 450 aaPredicted RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 C1orf216Q8TAB5 229 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 FIBINQ8TAL6 211 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 CDC6Q99741 560 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 INTS2Q9H0H0 1204 aaKnown RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 RSPH9Q9H1X1 276 aaPredicted RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 AASDHPPTQ9NRN7 309 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 INTS6Q9UL03 887 aaKnown RBP14.2□□□□□ -0.14
HDAC5-208ENST00000588419 ERVW-1Q9UQF0 538 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 TLR6Q9Y2C9 796 aa14.2□□□□□ -0.14
HDAC5-208ENST00000588419 TDRD6O60522 2096 aaKnown RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 FAM221BA6H8Z2 402 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 SART1O43290 800 aaKnown RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 LETM1O95202 739 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 TACR2P21452 398 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 USP8P40818 1118 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 PPP1R2P41236 205 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 STK19P49842 368 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 COL9A2Q14055 689 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 CST6Q15828 149 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 KCNT1Q5JUK3 1230 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 SYPL2Q5VXT5 272 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 TTI2Q6NXR4 508 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 NCEH1Q6PIU2 408 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 GLRX5Q86SX6 157 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 LMO3Q8TAP4 145 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 BAHD1Q8TBE0 780 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 IGSF8Q969P0 613 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 MYO19Q96H55 970 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 RPL10LQ96L21 214 aaKnown RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 KREMEN1Q96MU8 473 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 ACE2Q9BYF1 805 aaPredicted RBP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 FAM204AQ9H8W3 233 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 PCDHGB2Q9Y5G2 931 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC5-208ENST00000588419 CACNA1GO43497 2377 aa14.19□□□□□ -0.14
HDAC5-208ENST00000588419 FAM149AA5PLN7 773 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 E5RJQ4 531 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 F5H5T6 163 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 P4HA2O15460 535 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
HDAC5-208ENST00000588419 FYNP06241 537 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 IGHV4-34P06331 123 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 GNA15P30679 374 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 GRK6P43250 576 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms