RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 RPL34P49207 117 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 RPS24P62847 133 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 SFSWAPQ12872 951 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 SUZ12Q15022 739 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 KIF19Q2TAC6 998 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 HNRNPA1L2Q32P51 320 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 MS4A13Q5J8X5 152 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 DBX2Q6ZNG2 339 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 USP30Q70CQ3 517 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 SCUBE3Q8IX30 993 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 BAHD1Q8TBE0 780 aaPredicted RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 MYO19Q96H55 970 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 SLC39A13Q96H72 371 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 LMLNQ96KR4 655 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 RSPH9Q9H1X1 276 aaPredicted RBP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 NAALADL1Q9UQQ1 740 aa16.51■□□□□ 0.23
ERCC1-206ENST00000588300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
ERCC1-206ENST00000588300 TP53BP1Q12888 1972 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 PKD1L2Q7Z442 2459 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 CAPN9O14815 690 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MED7O43513 233 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 RNASEH1O60930 286 aaKnown RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MOCS3O95396 460 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MOCS2O96007 188 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 APOEP02649 317 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 BMP6P22004 513 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MORC3Q14149 939 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MEA1Q16626 185 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 BEND5Q7L4P6 421 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 SLCO6A1Q86UG4 719 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 KDM1BQ8NB78 822 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 GANCQ8TET4 914 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MYEOVQ96EZ4 313 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 CDC6Q99741 560 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 PABPC3Q9H361 631 aaKnown RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 MTG2Q9H4K7 406 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 KIAA1522Q9P206 1035 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 INTS6Q9UL03 887 aaKnown RBP16.5■□□□□ 0.23
ERCC1-206ENST00000588300 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 ANKRD6Q9Y2G4 727 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 SNX11Q9Y5W9 270 aa16.5■□□□□ 0.23
ERCC1-206ENST00000588300 PTPRBP23467 1997 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 SPEGQ15772 3267 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 PLXNA2O75051 1894 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 SIN3BO75182 1162 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 LUC7L3O95232 432 aaKnown RBP16.49■□□□□ 0.23
ERCC1-206ENST00000588300 STX17P56962 302 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 PAK1Q13153 545 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 ARID5BQ14865 1188 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 DCAF6Q58WW2 860 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 PITRM1Q5JRX3 1037 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 KIAA0895LQ68EN5 471 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 DENND1BQ6P3S1 775 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 ADAT2Q7Z6V5 191 aaKnown RBP16.49■□□□□ 0.23
ERCC1-206ENST00000588300 PROSER1Q86XN7 944 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
ERCC1-206ENST00000588300 CFAP52Q8N1V2 620 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 IGSF8Q969P0 613 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 MRGPRX3Q96LB0 322 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 FBXL12Q9NXK8 326 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 ERVW-1Q9UQF0 538 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 PLXNB3Q9ULL4 1909 aa16.49■□□□□ 0.23
ERCC1-206ENST00000588300 TARSL2A2RTX5 802 aaKnown RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 BIN1O00499 593 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 LETM1O95202 739 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 SRPRAP08240 638 aaKnown RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 CCT8P50990 548 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 SCAPQ12770 1279 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 CST6Q15828 149 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 FSCBQ5H9T9 825 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 CCNI2Q6ZMN8 369 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 CHSY1Q86X52 802 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 LGI2Q8N0V4 545 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 BTN2A3PQ96KV6 586 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 MED15Q96RN5 788 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 POPDC2Q9HBU9 364 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 UBE2TQ9NPD8 197 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-206ENST00000588300 TJP2Q9UDY2 1190 aa16.48■□□□□ 0.23
ERCC1-206ENST00000588300 ITIH6Q6UXX5 1313 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 EDDM13A0A1B0GTR0 161 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 FAM47DPA6NHR8 397 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 LRRC72A6NJI9 287 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 E5RJQ4 531 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 PAPSS1O43252 624 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-206ENST00000588300 THAP12O43422 761 aa16.47■□□□□ 0.23
ERCC1-206ENST00000588300 FGFR1OPO95684 399 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms