RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 CENPIQ92674 756 aaPredicted RBP10.44□□□□□ -0.74
TPM4-207ENST00000588032 TRIM11Q96F44 468 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 RPRD1AQ96P16 312 aaPredicted RBP10.44□□□□□ -0.74
TPM4-207ENST00000588032 CIPCQ9C0C6 399 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 RETREG1Q9H6L5 497 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 PARVAQ9NVD7 372 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 POLR3BQ9NW08 1133 aaPredicted RBP10.44□□□□□ -0.74
TPM4-207ENST00000588032 CALCOCO1Q9P1Z2 691 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 HCN2Q9UL51 889 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 HS3ST4Q9Y661 456 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 STON1Q9Y6Q2 735 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 KIAA1549LQ6ZVL6 1849 aa10.44□□□□□ -0.74
TPM4-207ENST00000588032 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 TCRBV21S2A2A0A5A6 115 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 FAM170AA1A519 330 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ANTXRLA6NF34 631 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 DRGXA6NNA5 263 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 DDX3XO00571 662 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM4-207ENST00000588032 SYNCRIPO60506 623 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 CLDN11O75508 207 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 GYPCP04921 128 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 DLDP09622 509 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 SKILP12757 684 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 RRM1P23921 792 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 HNRNPH3P31942 346 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 CASP14P31944 242 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 CD70P32970 193 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ADRA1BP35368 520 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 PXNP49023 591 aaPredicted RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 PLK1P53350 603 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 AIF1P55008 147 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 CDH4P55283 916 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ZNF177Q13360 481 aaPredicted RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 ZNF234Q14588 700 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 TDRD12Q587J7 1177 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 E4F1Q66K89 784 aaPredicted RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 HGSNATQ68CP4 663 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 TMEM215Q68D42 235 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 MBLAC2Q68D91 279 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 LAIR1Q6GTX8 287 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 PLEKHA7Q6IQ23 1121 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ANO7Q6IWH7 933 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 DCUN1D2Q6PH85 259 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 SARM1Q6SZW1 724 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 CEP68Q76N32 757 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ASCL5Q7RTU5 278 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 PHLDB2Q86SQ0 1253 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 CCAR2Q8N163 923 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 PGBD3Q8N328 593 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 KDM1BQ8NB78 822 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 OR8K1Q8NGG5 319 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 JOSD2Q8TAC2 188 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 OLIG1Q8TAK6 271 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 RUBCNQ92622 972 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 TTC17Q96AE7 1141 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 LOXL4Q96JB6 756 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 LMLNQ96KR4 655 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ACOX2Q99424 681 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 CNPY3Q9BT09 278 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ADAM33Q9BZ11 813 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 SIK2Q9H0K1 926 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 ISCUQ9H1K1 167 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 MRPL47Q9HD33 250 aaKnown RBP10.43□□□□□ -0.74
TPM4-207ENST00000588032 BCCIPQ9P287 314 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM4-207ENST00000588032 ADAMTS1Q9UHI8 967 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 VANGL2Q9ULK5 521 aa10.43□□□□□ -0.74
TPM4-207ENST00000588032 MUC6Q6W4X9 2439 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 IGLV3-10A0A075B6K4 115 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 A0A1W2PQF6 199 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 TMCO5BA8MYB1 307 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ZNF217O75362 1048 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 SRPRAP08240 638 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 IL12RB1P42701 662 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 WASP42768 502 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ST8SIA6P61647 398 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 NRG1Q02297 640 aaPredicted RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 SULT2A1Q06520 285 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 LMAN2Q12907 356 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 MAMLD1Q13495 774 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 CDO1Q16878 200 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 PPP1R15BQ5SWA1 713 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 SERPINA13PQ6UXR4 307 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 SETD3Q86TU7 594 aaPredicted RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 FAM131BQ86XD5 332 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 VSTM4Q8IW00 320 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 GPR161Q8N6U8 529 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 MDGA1Q8NFP4 955 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 WFDC5Q8TCV5 224 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 FAM172AQ8WUF8 416 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 IGSF8Q969P0 613 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 NTAN1Q96AB6 310 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ZC3H10Q96K80 434 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 MCEEQ96PE7 176 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 NCAPGQ9BPX3 1015 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms