RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ALOX15P16050 662 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 ARRB2P32121 409 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 RPL34P49207 117 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 PAPOLAP51003 745 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 GTF2A2P52657 109 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 PPM1JQ5JR12 505 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 RALGPS1Q5JS13 557 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 FOXB2Q5VYV0 432 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 STRADAQ7RTN6 431 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 GPR142Q7Z601 462 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 P2RY11Q96G91 374 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 TRAPPC9Q96Q05 1148 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 TMEM216Q9P0N5 145 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 RCOR3Q9P2K3 495 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 DERAQ9Y315 318 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 H3BRB1 525 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 ZNF195O14628 629 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 STRNO43815 780 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 STK10O94804 968 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 LYNP07948 512 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 UBTFL6P0CB48 400 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 SMPD1P17405 629 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 CALRP27797 417 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 TYK2P29597 1187 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 HARS2P49590 506 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 BCAT1P54687 386 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 CDC16Q13042 620 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 BSPRYQ5W0U4 402 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 TUT1Q9H6E5 874 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 TXNDC16Q9P2K2 825 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 FZD10Q9ULW2 581 aa17.3■□□□□ 0.36
PRKCSH-205ENST00000587327 MYO18AQ92614 2054 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 HCRTO43612 131 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 MFSD11O43934 449 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 MMP3P08254 477 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 RALBP11234 206 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 CCDC130P13994 396 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ADORA2BP29275 332 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 GRB14Q14449 540 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ZBTB6Q15916 424 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 PGM2L1Q6PCE3 622 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 FAM131BQ86XD5 332 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 CMTM5Q96DZ9 223 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 MAML3Q96JK9 1138 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 PRDM16Q9HAZ2 1276 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 TUBGCP4Q9UGJ1 667 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ADCY6O43306 1168 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 POLBP06746 335 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ERVK-10P10266 1014 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 GLUD2P49448 558 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 SATB1Q01826 763 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 BTKQ06187 659 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 GRIK4Q16099 956 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 RSPH3Q86UC2 560 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 ACTRT2Q8TDY3 377 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 PYDC1Q8WXC3 89 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 SH3GL3Q99963 347 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
PRKCSH-205ENST00000587327 PDGFRBP09619 1106 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 MX2P20592 715 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 PSMB4P28070 264 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 GP5P40197 560 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 MATKP42679 507 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 ACADSBP45954 432 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DCAF4L1Q3SXM0 396 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 PDPK2PQ6A1A2 396 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 RAPH1Q70E73 1250 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DHDDSQ86SQ9 333 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 PSTKQ8IV42 348 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CRYBG2Q8N1P7 616 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 GALNT15Q8N3T1 639 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 NETO2Q8NC67 525 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 OR6Y1Q8NGX8 325 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 PPP2R3CQ969Q6 453 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 C18orf25Q96B23 403 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 PGBD4Q96DM1 585 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DDX50Q9BQ39 737 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 FERMT1Q9BQL6 677 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CEP41Q9BYV8 373 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 FAM192AQ9GZU8 254 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 IL1RAPL1Q9NZN1 696 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CPA3P15088 417 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 MLH1P40692 756 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 ITGA9Q13797 1035 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms