RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZNF177Q13360 481 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 KRT81Q14533 505 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 BOLA3Q53S33 107 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 FAM133BQ5BKY9 247 aaKnown RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OTUD1Q5VV17 481 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 NADSYN1Q6IA69 706 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 CCDC185Q8N715 623 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 NIPA2Q8N8Q9 360 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 HSPH1Q92598 858 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 NTAN1Q96AB6 310 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OSGEPQ9NPF4 335 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 DONSONQ9NYP3 566 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 CALCOCO1Q9P1Z2 691 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 XPO7Q9UIA9 1087 aaKnown RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 AP4E1Q9UPM8 1137 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 R4GN57 208 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OTOGLQ3ZCN5 2332 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-215ENST00000584944 A0A1B0GVM2 712 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 MACROD2A1Z1Q3 448 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 TCAF2A6NFQ2 919 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 E9PAM4 449 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 TULP3O75386 442 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 PENKP01210 267 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-215ENST00000584944 KRT7P08729 469 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 SP9P0CG40 484 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 TNNT1P13805 278 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 MIPP30301 263 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 GGCXP38435 758 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 ARL4AP40617 200 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 GRIA2P42262 883 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 SLC1A1P43005 524 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 GALK1P51570 392 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 TPI1P60174 286 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 RPS24P62847 133 aaKnown RBP14.3□□□□□ -0.12
TRAF4-215ENST00000584944 PPP6R3Q5H9R7 873 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-215ENST00000584944 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 FBXL22Q6P050 247 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 DAAM2Q86T65 1068 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 FAM217AQ8IXS0 508 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 UCMAQ8WVF2 138 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 ZYG11BQ9C0D3 744 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAF4-215ENST00000584944 MIA3Q5JRA6 1907 aa14.3□□□□□ -0.12
TRAF4-215ENST00000584944 LRCH4O75427 683 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 CLDN11O75508 207 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 KAT7O95251 611 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 MAN1A1P33908 653 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 ID4P47928 161 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 SLC6A11P48066 632 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 SCAPQ12770 1279 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 EIF4EBP2Q13542 120 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-215ENST00000584944 FBXO43Q4G163 708 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 FYB2Q5VWT5 728 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 SDE2Q6IQ49 451 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 BNIPLQ7Z465 357 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 ANKS1BQ7Z6G8 1248 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 PSTKQ8IV42 348 aaKnown RBP14.29□□□□□ -0.12
TRAF4-215ENST00000584944 MAP7D3Q8IWC1 876 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 MAML2Q8IZL2 1156 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-215ENST00000584944 KCTD6Q8NC69 237 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 CHFRQ96EP1 664 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 CIPCQ9C0C6 399 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 OSBPL2Q9H1P3 480 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 LTB4R2Q9NPC1 389 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAF4-215ENST00000584944 FZD10Q9ULW2 581 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 COL4A3Q01955 1670 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 TICRRQ7Z2Z1 1910 aa14.29□□□□□ -0.12
TRAF4-215ENST00000584944 FRYLO94915 3013 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 H3BRJ5 948 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 EEF2KO00418 725 aaKnown RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 BUB1O43683 1085 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 MTA2O94776 668 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 LUC7L3O95232 432 aaKnown RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 HOXD9P28356 352 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 EPHB2P29323 1055 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 OR1E1P30953 314 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 L1CAMP32004 1257 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 ZNF135P52742 658 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 CDH4P55283 916 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 SEC13P55735 322 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 SMTNL2Q2TAL5 461 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
TRAF4-215ENST00000584944 RNF219Q5W0B1 726 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-215ENST00000584944 ZC3H14Q6PJT7 736 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms