RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MFSD7Q6UXD7 560 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 SPOCD1Q6ZMY3 1216 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 ZNF683Q8IZ20 524 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.88■□□□□ 0.61
RFFL-211ENST00000584541 RSAD2Q8WXG1 361 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 TSC1Q92574 1164 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 ZFYVE19Q96K21 471 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 PBKQ96KB5 322 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 CSPG4P5Q96PW8 444 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 PSMB7Q99436 277 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 RPP25Q9BUL9 199 aaKnown RBP18.88■□□□□ 0.61
RFFL-211ENST00000584541 RETREG1Q9H6L5 497 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 SNX12Q9UMY4 172 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 C3orf70A6NLC5 250 aaPredicted RBP18.87■□□□□ 0.61
RFFL-211ENST00000584541 DRGXA6NNA5 263 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 TBL1XO60907 577 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 PYGMP11217 842 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 TCP1P17987 556 aaKnown RBP18.87■□□□□ 0.61
RFFL-211ENST00000584541 HOXC13P31276 330 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 GAD2Q05329 585 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 MMRN1Q13201 1228 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 ZNF211Q13398 564 aaPredicted RBP18.87■□□□□ 0.61
RFFL-211ENST00000584541 DHCR24Q15392 516 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 PPP2R5EQ16537 467 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 ANKRD20A8PQ5CZ79 823 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 LY6G5CQ5SRR4 150 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 MPP7Q5T2T1 576 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 TICRRQ7Z2Z1 1910 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 RFX6Q8HWS3 928 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 CFAP52Q8N1V2 620 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 IGSF8Q969P0 613 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 ASIC4Q96FT7 647 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 PRICKLE1Q96MT3 831 aaPredicted RBP18.87■□□□□ 0.61
RFFL-211ENST00000584541 BBS2Q9BXC9 721 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 PRDM16Q9HAZ2 1276 aa18.87■□□□□ 0.61
RFFL-211ENST00000584541 A0A1B0GVM2 712 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 TCAF2A6NFQ2 919 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 GFRA2O00451 464 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ZNF500O60304 480 aaPredicted RBP18.86■□□□□ 0.61
RFFL-211ENST00000584541 CLDN11O75508 207 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ADH5P11766 374 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ARSAP15289 507 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 PRLRP16471 622 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 RHOQP17081 205 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 CDKN2BP42772 138 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 CDH4P55283 916 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 RPS24P62847 133 aaKnown RBP18.86■□□□□ 0.61
RFFL-211ENST00000584541 ZP2Q05996 745 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 RUNX3Q13761 415 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 TFDP2Q14188 446 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 DCAF12L1Q5VU92 463 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 PAPD7Q5XG87 772 aaKnown RBP18.86■□□□□ 0.61
RFFL-211ENST00000584541 CHST9Q7L1S5 443 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 TMEM25Q86YD3 366 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 SLC44A3Q8N4M1 653 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ZNF557Q8N988 423 aaPredicted RBP18.86■□□□□ 0.61
RFFL-211ENST00000584541 CSGALNACT1Q8TDX6 532 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ZNF592Q92610 1267 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 FAF2Q96CS3 445 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 RNF157Q96PX1 679 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ASB2Q96Q27 587 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 OSBPL9Q96SU4 736 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 OSBPL8Q9BZF1 889 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 ECT2Q9H8V3 914 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 MPP6Q9NZW5 540 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 MARK1Q9P0L2 795 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 SAR1BQ9Y6B6 198 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 MYO10Q9HD67 2058 aa18.86■□□□□ 0.61
RFFL-211ENST00000584541 TCF20Q9UGU0 1960 aaKnown RBP18.85■□□□□ 0.61
RFFL-211ENST00000584541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.85■□□□□ 0.61
RFFL-211ENST00000584541 H0Y626 953 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 CES2O00748 559 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 CYP17A1P05093 508 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 ZFXP17010 805 aaPredicted RBP18.85■□□□□ 0.61
RFFL-211ENST00000584541 ERCC2P18074 760 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 AMPD1P23109 780 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 IL4RP24394 825 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 CXCR5P32302 372 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 PTPN7P35236 360 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 SGSHP51688 502 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 ZNF177Q13360 481 aaPredicted RBP18.85■□□□□ 0.61
RFFL-211ENST00000584541 DPYSQ14117 519 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 TAZQ16635 292 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 KAZNQ674X7 775 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 RHBDF2Q6PJF5 856 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 BHMTQ93088 406 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 MYEOVQ96EZ4 313 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 XPO6Q96QU8 1125 aaKnown RBP18.85■□□□□ 0.61
RFFL-211ENST00000584541 HPS4Q9NQG7 708 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 ARHGEF4Q9NR80 690 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 TMEM248Q9NWD8 314 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 EFR3BQ9Y2G0 817 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 CUL9Q8IWT3 2517 aa18.85■□□□□ 0.61
RFFL-211ENST00000584541 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 hCG_1818297A0A087WSY0 165 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms