RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	RNF220	Q5VTB9	566 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	C1orf228	Q6PIY5	440 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PRPF39	Q86UA1	669 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	RFX6	Q8HWS3	928 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TEX9	Q8N6V9	391 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CYTH2	Q99418	400 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	LPIN3	Q9BQK8	851 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	SYT15	Q9BQS2	421 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	IMPG2	Q9BZV3	1241 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	GPATCH2L	Q9NWQ4	482 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	DLGAP2	Q9P1A6	1054 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	GTF2A1L	Q9UNN4	478 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	WASF2	Q9Y6W5	498 aa		11.93	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	B4GALT4	O60513	344 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PIGR	P01833	764 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ERBB2	P04626	1255 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CYP17A1	P05093	508 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	KRT20	P35900	424 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ELK3	P41970	407 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	KDSR	Q06136	332 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	LRRC36	Q1X8D7	754 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	SLFN12L	Q6IEE8	588 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MAMDC4	Q6UXC1	1216 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ZCCHC23	Q6ZST2	131 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CDHR3	Q6ZTQ4	885 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CCDC116	Q8IYX3	515 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	RCOR2	Q8IZ40	523 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	BBOF1	Q8ND07	529 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PPTC7	Q8NI37	304 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	NRG4	Q8WWG1	115 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TTC25	Q96NG3	672 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TMEM120A	Q9BXJ8	343 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MAGEB5	Q9BZ81	275 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	NIF3L1	Q9GZT8	377 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MANSC1	Q9H8J5	431 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ALOX15B	O15296	676 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	GYG2	O15488	501 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	LPXN	O60711	386 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	LRCH4	O75427	683 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	DCTN3	O75935	186 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ENO1	P06733	434 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	C21orf58	P58505	322 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	OASL	Q15646	514 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	DGKD	Q16760	1214 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	WSCD2	Q2TBF2	565 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ACSBG2	Q5FVE4	666 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PPP1R15B	Q5SWA1	713 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	FYB2	Q5VWT5	728 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TMEM154	Q6P9G4	183 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	FAM20C	Q8IXL6	584 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CDC26	Q8NHZ8	85 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	FATE1	Q969F0	183 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MCUR1	Q96AQ8	359 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ACAP3	Q96P50	834 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	C16orf70	Q9BSU1	422 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ARHGAP39	Q9C0H5	1083 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ZFYVE28	Q9HCC9	887 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	FKBP14	Q9NWM8	211 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	SIX4	Q9UIU6	781 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CNTN6	Q9UQ52	1028 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TMED5	Q9Y3A6	229 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	LOC285556	D6RIA3	1793 aa		11.92	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MYO18A	Q92614	2054 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063		A0A1W2PQ67	120 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	C3orf70	A6NLC5	250 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	GPR25	O00155	361 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CASQ2	O14958	399 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TOM1L1	O75674	476 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	FBXO21	O94952	628 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MT-ND3	P03897	115 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MYL2	P10916	166 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TBXAS1	P24557	533 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	EVI2B	P34910	448 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	EFNA5	P52803	228 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	STK11	Q15831	433 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	DUSP28	Q4G0W2	176 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ATF7IP2	Q5U623	682 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	OLFML2B	Q68BL8	750 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	IFNL1	Q8IU54	200 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	EFCAB3	Q8N7B9	438 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PPM1N	Q8N819	430 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	GRAMD1A	Q96CP6	724 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	TSSK1B	Q9BXA7	367 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PCDH18	Q9HCL0	1135 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	NMRK1	Q9NWW6	199 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CPSF3	Q9UKF6	684 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PHF24	Q9UPV7	400 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063		A0A1B0GVG6	124 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MANSC4	A6NHS7	340 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	KBTBD13	C9JR72	458 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	CAPN9	O14815	690 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	HCRT	O43612	131 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	AHCYL1	O43865	530 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	HAUS5	O94927	633 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	AMPD1	P23109	780 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ETV3	P41162	512 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	RENBP	P51606	427 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	PSMD7	P51665	324 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	ARFIP2	P53365	341 aa		11.91	□□□□□ -0.5
CDK5RAP3-231	ENST00000584063	MAP2K5	Q13163	448 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms