RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FAM81BQ96LP2 452 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 UBXN6Q9BZV1 441 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 LHX5Q9H2C1 402 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 MTG2Q9H4K7 406 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 PCOLCE2Q9UKZ9 415 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 SIK3Q9Y2K2 1263 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 PLXNA2O75051 1894 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 A0A1B0GTH6 734 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 METTL12A8MUP2 240 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 EPHB6O15197 1021 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 CAPNS1P04632 268 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ACADMP11310 421 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 LCP1P13796 627 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 UCHL3P15374 230 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ZNF132P52740 706 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 SLC8A3P57103 927 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 POLR2FP61218 127 aaKnown RBP16.27■□□□□ 0.2
SKA2-209ENST00000583976 ARID5AQ03989 594 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 SCAPQ12770 1279 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 SLC14A1Q13336 389 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 CAMK2GQ13555 558 aaPredicted RBP16.27■□□□□ 0.2
SKA2-209ENST00000583976 MPPE1Q53F39 396 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 RFWD3Q6PCD5 774 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 SLCO6A1Q86UG4 719 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ADIPOR2Q86V24 386 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 MARCH9Q86YJ5 346 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 C1orf216Q8TAB5 229 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 RNF139Q8WU17 664 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ADAMTS14Q8WXS8 1223 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 MYEOVQ96EZ4 313 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 PRICKLE1Q96MT3 831 aaPredicted RBP16.27■□□□□ 0.2
SKA2-209ENST00000583976 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 ZDHHC5Q9C0B5 715 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 PLCB1Q9NQ66 1216 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 GGA2Q9UJY4 613 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 LHX6Q9UPM6 363 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 BTBD3Q9Y2F9 522 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 HBS1LQ9Y450 684 aaKnown RBP16.27■□□□□ 0.2
SKA2-209ENST00000583976 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
SKA2-209ENST00000583976 APC2O95996 2303 aa16.27■□□□□ 0.19
SKA2-209ENST00000583976 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 FAM221BA6H8Z2 402 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 FOXN3O00409 490 aaPredicted RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 PAEPP09466 180 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 VDRP11473 427 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 PABPC1P11940 636 aaKnown RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 SLC6A4P31645 630 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 CD70P32970 193 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 MATKP42679 507 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 HARS2P49590 506 aaKnown RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 DAOAP59103 153 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 COL9A2Q14055 689 aaPredicted RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 NR1I3Q14994 352 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 HLA-BQ31612 363 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 PROSER1Q86XN7 944 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 NEK11Q8NG66 645 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 SETD7Q8WTS6 366 aaKnown RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 RBSNQ9H1K0 784 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 GANQ9H2C0 597 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 ACP6Q9NPH0 428 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 TM7SF3Q9NS93 570 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
SKA2-209ENST00000583976 TOR4AQ9NXH8 423 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 HESX1Q9UBX0 185 aa16.26■□□□□ 0.19
SKA2-209ENST00000583976 KNL1Q8NG31 2342 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 CER1O95813 267 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 SETSIPP0DME0 302 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 OXTRP30559 389 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 CSNK1EP49674 416 aaKnown RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 RPS14P62263 151 aaKnown RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 HNRNPDQ14103 355 aaKnown RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 FAM133BQ5BKY9 247 aaKnown RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 MSANTD2Q6P1R3 559 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 AHI1Q8N157 1196 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.25■□□□□ 0.19
SKA2-209ENST00000583976 BAHD1Q8TBE0 780 aaPredicted RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 WFIKKN2Q8TEU8 576 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 SHC3Q92529 594 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 NAA15Q9BXJ9 866 aaKnown RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 STOML2Q9UJZ1 356 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.25■□□□□ 0.19
SKA2-209ENST00000583976 SNX11Q9Y5W9 270 aa16.25■□□□□ 0.19
SKA2-209ENST00000583976 M0QYV0 167 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms