RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CARD6Q9BX69 1037 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 HEMGNQ9BXL5 484 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 SPHK2Q9NRA0 654 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 STOML2Q9UJZ1 356 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 PCDHA3Q9Y5H8 950 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 TYW5A2RUC4 315 aaKnown RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 E9PAM4 449 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM72CH0Y354 149 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 DAPK3O43293 454 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 NARSO43776 548 aaKnown RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 TBL1XO60907 577 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 ADH1CP00326 375 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 KRT10P13645 584 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 L1CAMP32004 1257 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 PEX5P50542 639 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CDH6P55285 790 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RPS24P62847 133 aaKnown RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 DYNLT1P63172 113 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 NR1H3Q13133 447 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RUNX3Q13761 415 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 DHCR24Q15392 516 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 MPPE1Q53F39 396 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RABGAP1LQ5R372 815 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 ACBD5Q5T8D3 534 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM72AQ5TYM5 149 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 LRRC38Q5VT99 294 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM72DQ6L9T8 149 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 POLNQ7Z5Q5 900 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM72BQ86X60 149 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 RNF135Q8IUD6 432 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM217AQ8IXS0 508 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 GJD3Q8N144 294 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 HAUS1Q96CS2 278 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 NECAB3Q96P71 396 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-216ENST00000583804 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 BBS2Q9BXC9 721 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 AP1M1Q9BXS5 423 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CALN1Q9BXU9 219 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 HPS4Q9NQG7 708 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 STIM2Q9P246 746 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 CDC23Q9UJX2 597 aa11.3□□□□□ -0.6
TOP3A-216ENST00000583804 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 LRIG2O94898 1065 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 CYP17A1P05093 508 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 ADH5P11766 374 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 TCP1P17987 556 aaKnown RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 SGSHP51688 502 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 TPI1P60174 286 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 MRPS25P82663 173 aaKnown RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 GAD2Q05329 585 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 ITPRIPL2Q3MIP1 535 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
TOP3A-216ENST00000583804 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 TCF20Q9UGU0 1960 aaKnown RBP11.29□□□□□ -0.6
TOP3A-216ENST00000583804 H3BRJ5 948 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 FGGP02679 453 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 SRFP11831 508 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 TYRP14679 529 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 GOT1P17174 413 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 KDELR1P24390 212 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 EPHB2P29323 1055 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 ARL4AP40617 200 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 IRAK1P51617 712 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 PFKPQ01813 784 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 NRG1Q02297 640 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-216ENST00000583804 DPYSL2Q16555 572 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 LONRF2Q1L5Z9 754 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-216ENST00000583804 RFX6Q8HWS3 928 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CREG2Q8IUH2 290 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-216ENST00000583804 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms