RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 TRIM38O00635 465 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 FFAR2O15552 330 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 RNGTTO60942 597 aaKnown RBP11.58□□□□□ -0.56
CASC3-208ENST00000583649 MOCS3O95396 460 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 LATS1O95835 1130 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 KRT10P13645 584 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 DGKAP23743 735 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 CASP5P51878 434 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 KIF11P52732 1056 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 ADPRHP54922 357 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 TLE1Q04724 770 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 SGSM1Q2NKQ1 1148 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 HNRNPA1L2Q32P51 320 aaKnown RBP11.58□□□□□ -0.56
CASC3-208ENST00000583649 MPP7Q5T2T1 576 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 SCARA5Q6ZMJ2 495 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 CCDC73Q6ZRK6 1079 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 ADIPOR2Q86V24 386 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 MMAAQ8IVH4 418 aaKnown RBP11.58□□□□□ -0.56
CASC3-208ENST00000583649 FAM217AQ8IXS0 508 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 EXD3Q8N9H8 876 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 XXYLT1Q8NBI6 393 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 WDR36Q8NI36 951 aaKnown RBP11.58□□□□□ -0.56
CASC3-208ENST00000583649 CYFIP2Q96F07 1278 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 XYLT2Q9H1B5 865 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 FAM49BQ9NUQ9 324 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 NLGN3Q9NZ94 848 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 CLEC4EQ9ULY5 219 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 CEP83Q9Y592 693 aa11.58□□□□□ -0.56
CASC3-208ENST00000583649 EDDM13A0A1B0GTR0 161 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 IRAK2O43187 625 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 SLC7A4O43246 635 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 LATO43561 262 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 SIN3BO75182 1162 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 TCEA3O75764 348 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 TNFSF15O95150 251 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 THEGLP0DJG4 465 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 CR2P20023 1033 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 NDST1P52848 882 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 SKOR1P84550 965 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 CCDC15Q0P6D6 951 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 CLN3Q13286 438 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 NCOA4Q13772 614 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 KCNJ12Q14500 433 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 ADGRF1Q5T601 910 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 RBM44Q6ZP01 1051 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 CLEC20AQ6ZU45 233 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 DSG4Q86SJ6 1040 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 SPATS2Q86XZ4 545 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 IFI44Q8TCB0 444 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 RNF139Q8WU17 664 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 TAF4BQ92750 862 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 DNAJC19Q96DA6 116 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 DDX50Q9BQ39 737 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 IMPG2Q9BZV3 1241 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 EBF2Q9HAK2 575 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 LRRC4CQ9HCJ2 640 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 KLHL11Q9NVR0 708 aa11.57□□□□□ -0.56
CASC3-208ENST00000583649 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 HBS1LQ9Y450 684 aaKnown RBP11.57□□□□□ -0.56
CASC3-208ENST00000583649 CDRT15L2A8MXV6 281 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.56
CASC3-208ENST00000583649 IL1BP01584 269 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
CASC3-208ENST00000583649 ITGA2BP08514 1039 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 STAT6P42226 847 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 PSMD8P48556 350 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 RPIAP49247 311 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 SLC11A2P49281 568 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 MAPK8IP2Q13387 824 aaPredicted RBP11.56□□□□□ -0.56
CASC3-208ENST00000583649 ARID5BQ14865 1188 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 FAM46CQ5VWP2 391 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 GPRIN1Q7Z2K8 1008 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
CASC3-208ENST00000583649 CLEC14AQ86T13 490 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 C12orf29Q8N999 325 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 EXTL1Q92935 676 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 GLMNQ92990 594 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 APOLD1Q96LR9 279 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 NT5C1AQ9BXI3 368 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 SLC25A18Q9H1K4 315 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 PCDHB11Q9Y5F2 797 aa11.56□□□□□ -0.56
CASC3-208ENST00000583649 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 H3BM21 787 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 TMX2-CTNND1H3BSU7 103 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 WNT9AO14904 365 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 CYP2J2P51589 502 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
CASC3-208ENST00000583649 NFKB2Q00653 900 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 EIF3IQ13347 325 aaKnown RBP11.55□□□□□ -0.56
CASC3-208ENST00000583649 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
CASC3-208ENST00000583649 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms