RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SLC38A8A6NNN8 435 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 TULP3O75386 442 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 LARGE1O95461 756 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 ALDOCP09972 364 aaKnown RBP4.05□□□□□ -1.76
VAPA-206ENST00000583475 PSG1P11464 419 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 GRK5P34947 590 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 PNLIPRP1P54315 467 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 LINC00205P59089 165 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 SF3A3Q12874 501 aaKnown RBP eCLIP4.05□□□□□ -1.76
VAPA-206ENST00000583475 BTBD16Q32M84 506 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 KIAA1755Q5JYT7 1200 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 PIK3CD-AS1Q5SR53 167 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 TTLL5Q6EMB2 1281 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 TMEM88Q6PEY1 159 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 PAQR4Q8N4S7 273 aaPredicted RBP4.05□□□□□ -1.76
VAPA-206ENST00000583475 CLEC4CQ8WTT0 213 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 ATP2A3Q93084 1043 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 CRB3Q9BUF7 120 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 MLXIPQ9HAP2 919 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 TXNRD2Q9NNW7 524 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 PLCB1Q9NQ66 1216 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 THSD1Q9NS62 852 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.05□□□□□ -1.76
VAPA-206ENST00000583475 UTS2RQ9UKP6 389 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 PCDHA12Q9UN75 941 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 COG5Q9UP83 839 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 DAAM1Q9Y4D1 1078 aa4.05□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3DA0A087WVF3 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3IA0A087WXS9 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3EA0A087X179 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3KA0A087X1G2 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3BA6NDS4 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3FA6NER0 549 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3LB9A6J9 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 SYT5O00445 386 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 EPN2O95208 641 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 ALDOAP04075 364 aaKnown RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3HP0C7X1 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 CDK7P50613 346 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 CCT4P50991 539 aaKnown RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 FOXG1P55316 489 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 MORC3Q14149 939 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 SMTNL2Q2TAL5 461 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 MANEAQ5SRI9 462 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 ATPAF1Q5TC12 328 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 ASPHD1Q5U4P2 390 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3GQ6DHY5 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3CQ6IPX1 549 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 C1orf228Q6PIY5 440 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 COLCA1Q6ZS62 124 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 MDGA2Q7Z553 956 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 PIM3Q86V86 326 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 TBC1D3Q8IZP1 549 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 SPICE1Q8N0Z3 855 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 ATG16L2Q8NAA4 619 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 ADPRHL1Q8NDY3 354 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 SCAMP5Q8TAC9 235 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 HMGB4Q8WW32 186 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 KAT2AQ92830 837 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 EME1Q96AY2 570 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 NPAS1Q99742 590 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 RTKNQ9BST9 563 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 SORBS1Q9BX66 1292 aaKnown RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 OSBPL5Q9H0X9 879 aaPredicted RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 TAGLN3Q9UI15 199 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 HERC5Q9UII4 1024 aaKnown RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 DAPP1Q9UN19 280 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 LAMP3Q9UQV4 416 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 LZTS1Q9Y250 596 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 PCDHA10Q9Y5I2 948 aa4.04□□□□□ -1.76
VAPA-206ENST00000583475 COPG1Q9Y678 874 aaKnown RBP4.04□□□□□ -1.76
VAPA-206ENST00000583475 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 IGLV5-39A0A0G2JS06 123 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 MYMKA6NI61 221 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 CD8B2A6NJW9 211 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 KCNAB3O43448 404 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 ACTL6BO94805 426 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 NDUFB8O95169 186 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 ITGA2BP08514 1039 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 ADPRHP54922 357 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 POLE2P56282 527 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 ICA1Q05084 483 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 DLGAP5Q15398 846 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 ISM2Q6H9L7 571 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 LIN54Q6MZP7 749 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 RTL10Q7L3V2 364 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 SLC44A2Q8IWA5 706 aaPredicted RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 SAMD3Q8N6K7 520 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 SLC25A28Q96A46 364 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 NAF1Q96HR8 494 aaKnown RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 WDR83Q9BRX9 315 aaKnown RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 HTATIP2Q9BUP3 242 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 PABPC3Q9H361 631 aaKnown RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 AAMDCQ9H7C9 122 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 WDR26Q9H7D7 661 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 PRDM8Q9NQV8 689 aa4.03□□□□□ -1.76
VAPA-206ENST00000583475 LIN7CQ9NUP9 197 aaKnown RBP4.03□□□□□ -1.76
VAPA-206ENST00000583475 TMEM272A0A1B0GTI8 110 aa4.02□□□□□ -1.77
VAPA-206ENST00000583475 DPPA5A6NC42 116 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms