RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLC11A2P49281 568 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 GALCP54803 685 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 DAOAP59103 153 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 SFSWAPQ12872 951 aaKnown RBP14.09□□□□□ -0.15
SS18-222ENST00000582792 PNOCQ13519 176 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 EDRF1Q3B7T1 1238 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 MSANTD2Q6P1R3 559 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 GANCQ8TET4 914 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 SMARCE1Q969G3 411 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 TTC17Q96AE7 1141 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 NXPE2Q96DL1 559 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 LMLNQ96KR4 655 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 MTG2Q9H4K7 406 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 FBXL12Q9NXK8 326 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 SERGEFQ9UGK8 458 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 FLNBO75369 2602 aaKnown RBP14.08□□□□□ -0.16
SS18-222ENST00000582792 GOLGA6L7A0A1B0GV03 622 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 PLK4O00444 970 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 ENC1O14682 589 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.16
SS18-222ENST00000582792 ASLP04424 464 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 WNT1P04628 370 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 SETSIPP0DME0 302 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 CDK4P11802 303 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 CD19P15391 556 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 SLC6A4P31645 630 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 HNF1BP35680 557 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 ST8SIA6P61647 398 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 CUL2Q13617 745 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 ARID5BQ14865 1188 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 HNRNPA1L2Q32P51 320 aaKnown RBP14.08□□□□□ -0.16
SS18-222ENST00000582792 CBWD6Q4V339 395 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 PKDCCQ504Y2 493 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 FAM133BQ5BKY9 247 aaKnown RBP14.08□□□□□ -0.16
SS18-222ENST00000582792 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 PRAMEF14Q5SWL7 426 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 NUGGCQ68CJ6 796 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 NCEH1Q6PIU2 408 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 GATAD2AQ86YP4 633 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 MFN1Q8IWA4 741 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 UNC45BQ8IWX7 931 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 FIBINQ8TAL6 211 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 AZIN2Q96A70 460 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 SKA1Q96BD8 255 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 EEF2KMTQ96G04 330 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 UBL7Q96S82 380 aaPredicted RBP14.08□□□□□ -0.16
SS18-222ENST00000582792 EBF2Q9HAK2 575 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 COQ4Q9Y3A0 265 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 KNTC1P50748 2209 aa14.08□□□□□ -0.16
SS18-222ENST00000582792 LRRC72A6NJI9 287 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 O00370 1275 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 MID1O15344 667 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 ACSL4O60488 711 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 SIN3BO75182 1162 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 RFPL3O75679 317 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 LDOC1O95751 146 aaPredicted RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 ITGAVP06756 1048 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 C1SP09871 688 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 EPB41P11171 864 aaKnown RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 VDRP11473 427 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 LCP1P13796 627 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 JUPP14923 745 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 PPP1R2P41236 205 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 CSKP41240 450 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 YWHAEP62258 255 aaKnown RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 SHBQ15464 509 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 CST6Q15828 149 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 ZNF658Q5TYW1 1059 aaPredicted RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 DHX40Q8IX18 779 aaKnown RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 KDM1BQ8NB78 822 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 HJURPQ8NCD3 748 aaPredicted RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 OR2T34Q8NGX1 318 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 PIP4K2CQ8TBX8 421 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 SAP25Q8TEE9 199 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 IRGQQ8WZA9 623 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 CNDP2Q96KP4 475 aaKnown RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 MRGPRX3Q96LB0 322 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 PRICKLE1Q96MT3 831 aaPredicted RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 STIM2Q9P246 746 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 KIAA1468Q9P260 1216 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 ADAMTS1Q9UHI8 967 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 INTS6Q9UL03 887 aaKnown RBP14.07□□□□□ -0.16
SS18-222ENST00000582792 KIAA1257Q9ULG3 409 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
SS18-222ENST00000582792 A0A1W2PP55 124 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 A0A1W2PR77 199 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
SS18-222ENST00000582792 CBX4O00257 560 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 CETN3O15182 167 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 YKT6O15498 198 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
SS18-222ENST00000582792 GABBR2O75899 941 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms