RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CNPY4Q8N129 248 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 LRRC43Q8N309 656 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 CCDC197Q8NCU1 140 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 C8orf48Q96LL4 319 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 HAPLN3Q96S86 360 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 EBNA1BP2Q99848 306 aaKnown RBP23.29■■□□□ 1.32
CCDC47-204ENST00000582252 SMOC2Q9H3U7 446 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 FBXO44Q9H4M3 255 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 ARHGEF38Q9NXL2 777 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 ABI2Q9NYB9 513 aaPredicted RBP23.29■■□□□ 1.32
CCDC47-204ENST00000582252 PCDHB5Q9Y5E4 795 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 PTPRSQ13332 1948 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 OR6C75A6NL08 312 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 TBKBP1A7MCY6 615 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 ZWINTO95229 277 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 ACRP10323 421 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 EPHB2P29323 1055 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 GATMP50440 423 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 FPGSQ05932 587 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 LGSNQ5TDP6 509 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 ZNF280DQ6N043 979 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 SCAMP5Q8TAC9 235 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 TOP1MTQ969P6 601 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 HDAC11Q96DB2 347 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 ANLNQ9NQW6 1124 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 ADAM28Q9UKQ2 775 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 UPP2O95045 317 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 CCR1P32246 355 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 MAGEA11P43364 429 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 WDR5P61964 334 aaKnown RBP23.28■■□□□ 1.32
CCDC47-204ENST00000582252 MPP2Q14168 576 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 KBTBD12Q3ZCT8 623 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 VARS2Q5ST30 1063 aaKnown RBP23.28■■□□□ 1.32
CCDC47-204ENST00000582252 LRRC8BQ6P9F7 803 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 NUP93Q8N1F7 819 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 GSDMBQ8TAX9 411 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 VAT1Q99536 393 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 KLHL8Q9P2G9 620 aaPredicted RBP23.28■■□□□ 1.32
CCDC47-204ENST00000582252 DNAJB4Q9UDY4 337 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 TTLL3Q9Y4R7 772 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 MAD1L1Q9Y6D9 718 aa23.28■■□□□ 1.32
CCDC47-204ENST00000582252 SPAG7O75391 227 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 APOEP02649 317 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 CA4P22748 312 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 PRKCHP24723 683 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 CORO7P57737 925 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ZNF33AQ06730 810 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 GALNT2Q10471 571 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 WASHC5Q12768 1159 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ELAVL2Q12926 359 aaKnown RBP23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ITIH4Q14624 930 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 SEPT7Q16181 437 aaKnown RBP23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ZNF534Q76KX8 674 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 SLC26A11Q86WA9 606 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 LRRC6Q86X45 466 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ZNF567Q8N184 647 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 GDAP1Q8TB36 358 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 BADQ92934 168 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 SIGLEC10Q96LC7 697 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 TGS1Q96RS0 853 aaKnown RBP23.27■■□□□ 1.32
CCDC47-204ENST00000582252 NAT9Q9BTE0 207 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 ZNF180Q9UJW8 692 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 TRHDEQ9UKU6 1024 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 SCML2Q9UQR0 700 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 PCDHA11Q9Y5I1 949 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 PLXNA3P51805 1871 aa23.27■■□□□ 1.32
CCDC47-204ENST00000582252 TCP11X1B4DZS4 312 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 I6L893 689 aaPredicted RBP23.26■■□□□ 1.31
CCDC47-204ENST00000582252 LRIG2O94898 1065 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 MT-ND3P03897 115 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 ALDH2P05091 517 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 OR4Q2P0C623 313 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 EIF4EBP2Q13542 120 aaPredicted RBP23.26■■□□□ 1.31
CCDC47-204ENST00000582252 PPP2R5DQ14738 602 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 CTXN3Q4LDR2 81 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 ITPRIPL1Q6GPH6 555 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 PID1Q7Z2X4 250 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 PIGWQ7Z7B1 504 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 C4orf33Q8N1A6 199 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 OTUD6BQ8N6M0 293 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 SERPINB11Q96P15 392 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 TMEM175Q9BSA9 504 aa23.26■■□□□ 1.31
CCDC47-204ENST00000582252 CEP290O15078 2479 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 COL4A6Q14031 1691 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 TM9SF1O15321 606 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 FGF10O15520 208 aaPredicted RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 ASMTLO95671 621 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 KRT4P19013 534 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 TTC39BQ5VTQ0 682 aaPredicted RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 C6orf89Q6UWU4 347 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 MON1AQ86VX9 555 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 AGGF1Q8N302 714 aaeCLIP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 DENND1AQ8TEH3 1009 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 OXCT2Q9BYC2 517 aaPredicted RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 CATSPERBQ9H7T0 1116 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 MLXIPLQ9NP71 852 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 A0A1W2PPM1 405 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 SDR42E2A6NKP2 422 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 ERI2A8K979 691 aaKnown RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 TYROBPO43914 113 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms