RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 DACH1Q9UI36 760 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 NAALADL1Q9UQQ1 740 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 NEUROG3Q9Y4Z2 214 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 MEI4A8MW99 385 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 KCNU1A8MYU2 1149 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 E5RJQ4 531 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 GIPC1O14908 333 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 BCAT2O15382 392 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 THAP12O43422 761 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 LUC7L3O95232 432 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 MOCS3O95396 460 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 TRUB2O95900 331 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 PROS1P07225 676 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 CD70P32970 193 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 MAPK8P45983 427 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 ST8SIA6P61647 398 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 RPS14P62263 151 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 CDK17Q00537 523 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 CDH18Q13634 790 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 ST3GAL2Q16842 350 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 UAP1L1Q3KQV9 507 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 SYPL2Q5VXT5 272 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 ZNF776Q68DI1 518 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 DENND1BQ6P3S1 775 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 RFWD3Q6PCD5 774 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 SLC26A9Q7LBE3 791 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 TAC4Q86UU9 113 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 KDF1Q8NAX2 398 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 BTBD1Q9H0C5 482 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 CD93Q9NPY3 652 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 ADAMTS1Q9UHI8 967 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 CYTH4Q9UIA0 394 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 FZD4Q9ULV1 537 aa15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-216ENST00000580419 AKAP13Q12802 2813 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 ATXN2Q99700 1313 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 DFNA5O60443 496 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 RNASEH1O60930 286 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 CER1O95813 267 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 DNTTP04053 509 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 SLC9A1P19634 815 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 CCR1P32246 355 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 CDH5P33151 784 aaPredicted RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 CSKP41240 450 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 GRIA4P48058 902 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 SGSHP51688 502 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 AFF3P51826 1226 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 GRIK2Q13002 908 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 C5orf22Q49AR2 442 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 DCAF6Q58WW2 860 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 DCAF12L1Q5VU92 463 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 FAM71AQ8IYT1 594 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 WDTC1Q8N5D0 677 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 DEFB124Q8NES8 71 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 PGAP3Q96FM1 320 aaPredicted RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 PPP1R13BQ96KQ4 1090 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 MRGPRX3Q96LB0 322 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 PRMT1Q99873 361 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 NUCKS1Q9H1E3 243 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 CLSTN2Q9H4D0 955 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 TJP2Q9UDY2 1190 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 INTS6Q9UL03 887 aaKnown RBP15□□□□□ -0.01
SMARCE1-216ENST00000580419 DAAM1Q9Y4D1 1078 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 CEP83Q9Y592 693 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 ACACAQ13085 2346 aa15□□□□□ -0.01
SMARCE1-216ENST00000580419 NYNRINQ9P2P1 1898 aaKnown RBP14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 SPEGQ15772 3267 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 FREM2Q5SZK8 3169 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 DOCK4Q8N1I0 1966 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 GOLGA6L7A0A1B0GV03 622 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 A0A1B0GVM2 712 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 TCAF2A6NFQ2 919 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 CD27P26842 260 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 RPS24P62847 133 aaKnown RBP14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 ECT2LQ008S8 904 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 C11orf57Q6ZUT1 292 aaPredicted RBP14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 ARCQ7LC44 396 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 DEFB119Q8N690 84 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 CYB5D2Q8WUJ1 264 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 NT5C3BQ969T7 300 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 FAM131CQ96AQ9 280 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 CPXM1Q96SM3 734 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 GTPBP2Q9BX10 602 aaKnown RBP14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 TMEM121BQ9BXQ6 578 aaPredicted RBP14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 NDST4Q9H3R1 872 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 SIX2Q9NPC8 291 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 MSRB2Q9Y3D2 182 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
SMARCE1-216ENST00000580419 PKD1L2Q7Z442 2459 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 EDDM13A0A1B0GTR0 161 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 CXorf51AA0A1B0GTR3 108 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 F5H5T6 163 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 PIK3R2O00459 728 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 CBFA2T3O75081 653 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 SEMA4FO95754 770 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 HLA-EP13747 358 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 ABCB4P21439 1286 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms