RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CD70P32970 193 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 RGS7P49802 495 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 CDH18Q13634 790 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 HNRNPA1L2Q32P51 320 aaKnown RBP18.57■□□□□ 0.56
MKS1-209ENST00000580127 PKDCCQ504Y2 493 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 CCDC157Q569K6 752 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 PMF1Q6P1K2 205 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
MKS1-209ENST00000580127 SERPINB11Q96P15 392 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 TLR6Q9Y2C9 796 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 FASNP49327 2511 aaKnown RBP18.57■□□□□ 0.56
MKS1-209ENST00000580127 GOLGA6L7A0A1B0GV03 622 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 A0A1W2PPC4 97 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 H0Y8X5 98 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 M0QYV0 167 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 PSMA7O14818 248 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 C1SP09871 688 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 ABCB4P21439 1286 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 PPP1R2P41236 205 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 CTSKP43235 329 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 PNOCQ13519 176 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 COL28A1Q2UY09 1125 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 TMPRSS12Q86WS5 348 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 PPM1KQ8N3J5 372 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 CARNMT1Q8N4J0 409 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 OR2T34Q8NGX1 318 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 SMARCE1Q969G3 411 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 SLC35C1Q96A29 364 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 GOLPH3LQ9H4A5 285 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 AASDHPPTQ9NRN7 309 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 TOR4AQ9NXH8 423 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 SLC12A6Q9UHW9 1150 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 FZD4Q9ULV1 537 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 BTBD3Q9Y2F9 522 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 RAXQ9Y2V3 346 aa18.56■□□□□ 0.56
MKS1-209ENST00000580127 EDDM13A0A1B0GTR0 161 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 KCNK3O14649 394 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 CAPN9O14815 690 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 PMM2O15305 246 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 PAPSS1O43252 624 aaPredicted RBP18.55■□□□□ 0.56
MKS1-209ENST00000580127 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
MKS1-209ENST00000580127 APOEP02649 317 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 HNF1BP35680 557 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 CSKP41240 450 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 ACADSBP45954 432 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 FMO5P49326 533 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 ARRB1P49407 418 aaPredicted RBP18.55■□□□□ 0.56
MKS1-209ENST00000580127 GALCP54803 685 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 CYP4F3Q08477 520 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 NNTQ13423 1086 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 SMAD1Q15797 465 aaKnown RBP18.55■□□□□ 0.56
MKS1-209ENST00000580127 CST6Q15828 149 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 CCDC40Q4G0X9 1142 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 FAM133BQ5BKY9 247 aaKnown RBP18.55■□□□□ 0.56
MKS1-209ENST00000580127 CEP63Q96MT8 703 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 MIS12Q9H081 205 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 ERVW-1Q9UQF0 538 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
MKS1-209ENST00000580127 SPEGQ15772 3267 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 P4HA2O15460 535 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SIN3BO75182 1162 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ITGAVP06756 1048 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 CD38P28907 300 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SLC6A4P31645 630 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SLC8A1P32418 973 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 CCR5P51681 352 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SGSHP51688 502 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 OXCT1P55809 520 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ECT2LQ008S8 904 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SLC12A1Q13621 1099 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 SND1Q7KZF4 910 aaKnown RBP eCLIP18.54■□□□□ 0.56
MKS1-209ENST00000580127 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
MKS1-209ENST00000580127 SCUBE3Q8IX30 993 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
MKS1-209ENST00000580127 TFAP2BQ92481 460 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 FAM149B1Q96BN6 582 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 DHTKD1Q96HY7 919 aaPredicted RBP18.54■□□□□ 0.56
MKS1-209ENST00000580127 ELF4Q99607 663 aaPredicted RBP18.54■□□□□ 0.56
MKS1-209ENST00000580127 NEUROG2Q9H2A3 272 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 TJP2Q9UDY2 1190 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ADAMTS1Q9UHI8 967 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 PCDHGA1Q9Y5H4 931 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 TMEM131Q92545 1883 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 ASPMQ8IZT6 3477 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 APC2O95996 2303 aa18.54■□□□□ 0.56
MKS1-209ENST00000580127 A0A1B0GTQ1 180 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 PIK3R2O00459 728 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 MED7O43513 233 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 LDOC1O95751 146 aaPredicted RBP18.53■□□□□ 0.56
MKS1-209ENST00000580127 ADH1BP00325 375 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 IGHV4-34P06331 123 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 JUPP14923 745 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 GOT1P17174 413 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 C5AR1P21730 350 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 RPS24P62847 133 aaKnown RBP18.53■□□□□ 0.56
MKS1-209ENST00000580127 SULT2A1Q06520 285 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 MS4A13Q5J8X5 152 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms