RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 A0A1W2PPC4 97 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 E9PAM4 449 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 CBX4O00257 560 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 PIK3R2O00459 728 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 VILLO15195 856 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 LATS1O95835 1130 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 PRB1P04280 392 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 IGHV4-34P06331 123 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 GALCP54803 685 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 CLDN6P56747 220 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 SLC45A4Q5BKX6 768 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 USP30Q70CQ3 517 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 MMAAQ8IVH4 418 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ZC3H3Q8IXZ2 948 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 WFDC5Q8TCV5 224 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 RSPH9Q9H1X1 276 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 NEUROG2Q9H2A3 272 aa13.1□□□□□ -0.31
CDK5RAP3-212ENST00000579175 KNTC1P50748 2209 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 MID1O15344 667 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ACSL4O60488 711 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 SIN3BO75182 1162 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 RFPL3O75679 317 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ITPKBP27987 946 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 CD38P28907 300 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 SYKP43405 635 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ARRB1P49407 418 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 RGS7P49802 495 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 TBX4P57082 545 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ENPEPQ07075 957 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 LRMPQ12912 555 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 CST6Q15828 149 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 NFIL3Q16649 462 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 ZNF557Q8N988 423 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 GDF3Q9NR23 364 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 STOML2Q9UJZ1 356 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 HPSEQ9Y251 543 aa13.09□□□□□ -0.31
CDK5RAP3-212ENST00000579175 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.31
CDK5RAP3-212ENST00000579175 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 CETN3O15182 167 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 IRAK2O43187 625 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 MOCS3O95396 460 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 ASLP04424 464 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 VDRP11473 427 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 CDK4P11802 303 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SLC6A4P31645 630 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SLC8A1P32418 973 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 CSKP41240 450 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 CDH18Q13634 790 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 HNRNPA1L2Q32P51 320 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 RNF219Q5W0B1 726 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 OR2T34Q8NGX1 318 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 OR14C36Q8NHC7 312 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 RBSNQ9H1K0 784 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SERGEFQ9UGK8 458 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 PCDHGA1Q9Y5H4 931 aa13.08□□□□□ -0.32
CDK5RAP3-212ENST00000579175 TTC34A8MYJ7 566 aa13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 YKT6O15498 198 aa13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 PAPSS1O43252 624 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 LTFP02788 710 aa13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 WNT1P04628 370 aa13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 C1SP09871 688 aa13.07□□□□□ -0.32
CDK5RAP3-212ENST00000579175 SETSIPP0DME0 302 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms