RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 TMEM110Q86TL2 294 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 MIB1Q86YT6 1006 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CHPFQ8IZ52 775 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CLHC1Q8NHS4 586 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 POLR1BQ9H9Y6 1135 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 MAGED1Q9Y5V3 778 aaPredicted RBP5.23□□□□□ -1.57
NF1-219ENST00000579081 ABCC3O15438 1527 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 PSTPIP1O43586 416 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CDC40O60508 579 aaKnown RBP eCLIP5.23□□□□□ -1.57
NF1-219ENST00000579081 LYNP07948 512 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CTSEP14091 401 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CCNCP24863 283 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CTXN3Q4LDR2 81 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 FAM199XQ6PEV8 388 aaPredicted RBP5.23□□□□□ -1.57
NF1-219ENST00000579081 RNF44Q7L0R7 432 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 ITIH5Q86UX2 942 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 CAMK1DQ8IU85 385 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 ZCCHC2Q9C0B9 1178 aaKnown RBP5.23□□□□□ -1.57
NF1-219ENST00000579081 RHBGQ9H310 441 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 RHBDL2Q9NX52 303 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 BARHL2Q9NY43 387 aa5.23□□□□□ -1.57
NF1-219ENST00000579081 A0A087WXM4 84 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TMEM114B3SHH9 223 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 AGRPO00253 132 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CCNT2O60583 730 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 PRR29P0C7W0 189 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 FGFR2P21802 821 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 GTF2H1P32780 548 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CLK2P49760 499 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 TSNQ15631 228 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 TNFAIP8L3Q5GJ75 292 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 FGD3Q5JSP0 725 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 ERMARDQ5T6L9 678 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CLEC4GQ6UXB4 293 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 BNC2Q6ZN30 1099 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 MARK2Q7KZI7 788 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 HAVCR2Q8TDQ0 301 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 FICDQ9BVA6 458 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CCDC177Q9NQR7 707 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 MARK1Q9P0L2 795 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 PRELID1Q9Y255 219 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 ARIH1Q9Y4X5 557 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 DUOX1Q9NRD9 1551 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TRIM49D1C9J1S8 452 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 H7C1W4 665 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 MSH4O15457 936 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 NDUFS2O75306 463 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 MED26O95402 600 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 PTX3P26022 381 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 PRDX5P30044 214 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 MAD2L1Q13257 205 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 TMEM44Q2T9K0 475 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CYP20A1Q6UW02 462 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TMC7Q7Z402 723 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CYP2U1Q7Z449 544 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 FAM220AQ7Z4H9 259 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 CYP4X1Q8N118 509 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 MAB21L3Q8N8X9 362 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 GPRC5AQ8NFJ5 357 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 HELQQ8TDG4 1101 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 KCTD14Q9BQ13 255 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 ADGRE3Q9BY15 652 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 NIF3L1Q9GZT8 377 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 EPB41L4BQ9H329 900 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TUBB1Q9H4B7 451 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 PCDHB12Q9Y5F1 795 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 NPHP3-ACAD11A0A0J9YXS1 232 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TTC26A0AVF1 554 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 RHOBTB3O94955 611 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 IFNA16P05015 189 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 RBP1P09455 135 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 GARTP22102 1010 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 WEE1P30291 646 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 RCVRNP35243 200 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 PEX5P50542 639 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 GALCP54803 685 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 NR1H2P55055 460 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 GEMIN4P57678 1058 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 RAB4BP61018 213 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 RAB2AP61019 212 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 BOLA3Q53S33 107 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 PGBD2Q6P3X8 592 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 MZT2AQ6P582 158 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 ZNF677Q86XU0 584 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 SCUBE1Q8IWY4 988 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 FAM71DQ8N9W8 422 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 OXER1Q8TDS5 423 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 REPS1Q96D71 796 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 SOHLH2Q9NX45 425 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 ADPRHL2Q9NX46 363 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 HAO1Q9UJM8 370 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 STUB1Q9UNE7 303 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 RBMXL2O75526 392 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 MTA2O94776 668 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 NR3C2P08235 984 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 ACO1P21399 889 aaKnown RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 CCNHP51946 323 aaPredicted RBP5.22□□□□□ -1.57
NF1-219ENST00000579081 DSG1Q02413 1049 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 DENND5BQ6ZUT9 1274 aa5.22□□□□□ -1.57
NF1-219ENST00000579081 TRPV3Q8NET8 790 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms