RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
MKS1-206ENST00000577824 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
MKS1-206ENST00000577824 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 LMLNQ96KR4 655 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 RPRD1AQ96P16 312 aaPredicted RBP13.1□□□□□ -0.31
MKS1-206ENST00000577824 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 BBS2Q9BXC9 721 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 MAGEB5Q9BZ81 275 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 ZYG11BQ9C0D3 744 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 PCDH18Q9HCL0 1135 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
MKS1-206ENST00000577824 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 SNX10Q9Y5X0 201 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 C3orf70A6NLC5 250 aaPredicted RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 MIF4GDA9UHW6 222 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 TRDMT1O14717 391 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 PEX5P50542 639 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 IRAK1P51617 712 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 ZXDAP98168 799 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 AMPD2Q01433 879 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 DPYSQ14117 519 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 TAZQ16635 292 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 CXorf57Q6NSI4 855 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
MKS1-206ENST00000577824 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 TMEM248Q9NWD8 314 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 TBC1D30Q9Y2I9 924 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
MKS1-206ENST00000577824 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 DCXO43602 365 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 TSPAN3O60637 253 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 TBL1XO60907 577 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 TULP3O75386 442 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 CNTN5O94779 1100 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 RHOQP17081 205 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 GOT1P17174 413 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 IL4RP24394 825 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 MARCKSL1P49006 195 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 MAPKAPK2P49137 400 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 STARD6P59095 220 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 TPI1P60174 286 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 DPYSL3Q14195 570 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 ANO4Q32M45 955 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 SLC44A4Q53GD3 710 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 ALFQ53S48 1182 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 IER5LQ5T953 404 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 SETD3Q86TU7 594 aaPredicted RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 ZNF687Q8N1G0 1237 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 RTL3Q8N8U3 475 aaKnown RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 WFDC5Q8TCV5 224 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 HSPH1Q92598 858 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 KRT35Q92764 455 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 EDAQ92838 391 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 CSPG4P5Q96PW8 444 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
MKS1-206ENST00000577824 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 ZKSCAN5Q9Y2L8 839 aa13.08□□□□□ -0.32
MKS1-206ENST00000577824 CHD5Q8TDI0 1954 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 NCOR1O75376 2440 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 A0A0A0MRY4 1105 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 H3BRJ5 948 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 DCLK1O15075 740 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 CREB3O43889 395 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 FTCDO95954 541 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 KDELR1P24390 212 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms