RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ARL13BQ3SXY8 428 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LAIR1Q6GTX8 287 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PRR23CQ6ZRP0 262 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PEX26Q7Z412 305 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARID3BQ8IVW6 561 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KATNAL2Q8IYT4 538 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CELF5Q8N6W0 485 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ADAM32Q8TC27 787 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SMARCD2Q92925 531 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NXPE3Q969Y0 559 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PEBP4Q96S96 227 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PRMT1Q99873 361 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TKTL2Q9H0I9 626 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FAM204AQ9H8W3 233 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ANLNQ9NQW6 1124 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GKN1Q9NS71 199 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLC12A6Q9UHW9 1150 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 EFR3BQ9Y2G0 817 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CPQQ9Y646 472 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MIA3Q5JRA6 1907 aa11.52□□□□□ -0.56
CDK5RAP3-204ENST00000577664 IGLV3-10A0A075B6K4 115 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ESPNB1AK53 854 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ANHXE9PGG2 379 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LEFTY2O00292 366 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CES2O00748 559 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MSI1O43347 362 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CKMP06732 381 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RETP07949 1114 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RARAP10276 462 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TCF4P15884 667 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 L1CAMP32004 1257 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MAGEA9P43362 315 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HARS2P49590 506 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 COPS2P61201 443 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CSTF1Q05048 431 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 USP4Q13107 963 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PDK2Q15119 407 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZNF77Q15935 545 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CSRP2Q16527 193 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CDO1Q16878 200 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZC3H12AQ5D1E8 599 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM78AQ5JUQ0 283 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZNF569Q5MCW4 686 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ADGRF1Q5T601 910 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM131BQ86XD5 332 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CPNE8Q86YQ8 564 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZNF683Q8IZ20 524 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RCOR2Q8IZ40 523 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CPXM2Q8N436 756 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC44A3Q8N4M1 653 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ATP6V0D2Q8N8Y2 350 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 EXD1Q8NHP7 514 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZSCAN18Q8TBC5 510 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TSC1Q92574 1164 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 OTUB2Q96DC9 234 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NACA2Q9H009 215 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GOLPH3Q9H4A6 298 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SEMA4GQ9NTN9 838 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RCOR3Q9P2K3 495 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PPARGC1AQ9UBK2 798 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RASAL2Q9UJF2 1139 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 WASF3Q9UPY6 502 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LAMA5O15230 3695 aa11.52□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DOCK8Q8NF50 2099 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 IGSF10Q6WRI0 2623 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 C3orf70A6NLC5 250 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DRGXA6NNA5 263 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FANCGO15287 622 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SPOPO43791 374 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GDF9O60383 454 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ACSL4O60488 711 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ECI2O75521 394 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 APOEP02649 317 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FCARP24071 287 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 IL4RP24394 825 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HOXC13P31276 330 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PTPN7P35236 360 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GNG11P61952 73 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FCHO2Q0JRZ9 810 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MPP7Q5T2T1 576 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ADGRG2Q8IZP9 1017 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ELSPBP1Q96BH3 223 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 WDR24Q96S15 920 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms