RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 TBC1D3IA0A087WXS9 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3EA0A087X179 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3KA0A087X1G2 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3BA6NDS4 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3FA6NER0 549 aaPredicted RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 AGAP5A6NIR3 686 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 EFCAB8A8MWE9 144 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3LB9A6J9 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 IPO5O00410 1097 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 FGBP02675 491 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 ALDOCP09972 364 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3HP0C7X1 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 RNASELQ05823 741 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 SRSF1Q07955 248 aaKnown RBP eCLIP5.92□□□□□ -1.46
NUP88-213ENST00000576862 RBMS2Q15434 407 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 LIPMQ5VYY2 423 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3GQ6DHY5 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3CQ6IPX1 549 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TMEM88Q6PEY1 159 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3Q8IZP1 549 aaPredicted RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 TMEM79Q9BSE2 394 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 PIMREGQ9BSJ6 248 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 BRD8Q9H0E9 1235 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 OSBPL5Q9H0X9 879 aaPredicted RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 SFXN1Q9H9B4 322 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 SEPSECSQ9HD40 501 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 TMEM45AQ9NWC5 275 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 ELOVL5Q9NYP7 299 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 SRP68Q9UHB9 627 aaKnown RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.92□□□□□ -1.46
NUP88-213ENST00000576862 PCDHA10Q9Y5I2 948 aa5.92□□□□□ -1.46
NUP88-213ENST00000576862 LMTK3Q96Q04 1460 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 USP12O75317 370 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 WNT1P04628 370 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 PRF1P14222 555 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 KIAA1755Q5JYT7 1200 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 KIAA1324Q6UXG2 1013 aaKnown RBP5.91□□□□□ -1.46
NUP88-213ENST00000576862 RTL10Q7L3V2 364 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 ANKRD13BQ86YJ7 626 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 PAQR4Q8N4S7 273 aaPredicted RBP5.91□□□□□ -1.46
NUP88-213ENST00000576862 MYCT1Q8N699 235 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 ADPRHL1Q8NDY3 354 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 KAT2BQ92831 832 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 ZNF48Q96MX3 618 aaPredicted RBP5.91□□□□□ -1.46
NUP88-213ENST00000576862 NPAS1Q99742 590 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 HTATIP2Q9BUP3 242 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 TXNRD2Q9NNW7 524 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.91□□□□□ -1.46
NUP88-213ENST00000576862 RCE1Q9Y256 329 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 AFG3L2Q9Y4W6 797 aa5.91□□□□□ -1.46
NUP88-213ENST00000576862 FAM90A20PA6NIJ5 464 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 UGDHO60701 494 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 RCAN1P53805 252 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 B4GALNT1Q00973 533 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 MTX1Q13505 466 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 RPS6KA2Q15349 733 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 TIGD6Q17RP2 521 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 PXDC1Q5TGL8 231 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 MDGA2Q7Z553 956 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.9□□□□□ -1.46
NUP88-213ENST00000576862 ADGRF4Q8IZF3 695 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 SLC2A12Q8TD20 617 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 SCARB1Q8WTV0 552 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 CPT1BQ92523 772 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 C3orf49Q96BT1 292 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 TRAPPC9Q96Q05 1148 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 ARHGAP39Q9C0H5 1083 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 PAPOLBQ9NRJ5 636 aaKnown RBP5.9□□□□□ -1.46
NUP88-213ENST00000576862 HEY2Q9UBP5 337 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 RIPOR2Q9Y4F9 1068 aa5.9□□□□□ -1.46
NUP88-213ENST00000576862 TRBV5-3A0A0A0MS03 114 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 LY6G6EA0A0G2JKS1 128 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 H0Y3Z8 333 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 TCEA3O75764 348 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 CST5P28325 142 aaPredicted RBP5.89□□□□□ -1.47
NUP88-213ENST00000576862 SERPINA4P29622 427 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 PRKAA2P54646 552 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 POSTNQ15063 836 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 TBRG1Q3YBR2 411 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 MIDNQ504T8 468 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 ZNF793Q6ZN11 406 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 NRACQ8N912 160 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 FAM47BQ8NA70 645 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 ZFYVE19Q96K21 471 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 IL21RQ9HBE5 538 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 NDUFAF4Q9P032 175 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 KCND3Q9UK17 655 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 ZNF521Q96K83 1311 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 NACADO15069 1562 aa5.89□□□□□ -1.47
NUP88-213ENST00000576862 A0A0G2JK05 382 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 hCG_1642624A0A1W2PR95 340 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 HMX3A6NHT5 357 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 F8W810 466 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 TLX3O43711 291 aaPredicted RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 NBNO60934 754 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 NR4A2P43354 598 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms