RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PTP4A2Q12974 167 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 EIF4HQ15056 248 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 CDO1Q16878 200 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 FIGNQ5HY92 759 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 TMEM215Q68D42 235 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 MON1BQ7L1V2 547 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 CNGA4Q8IV77 575 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 AHI1Q8N157 1196 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 PGBD3Q8N328 593 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 GAB3Q8WWW8 586 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 NT5C3BQ969T7 300 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 RPRD1AQ96P16 312 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 PRMT1Q99873 361 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 SELENOOQ9BVL4 669 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 WDCPQ9H6R7 721 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 NCDNQ9UBB6 729 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 EBF1Q9UH73 591 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 INVSQ9Y283 1065 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 LUC7L2Q9Y383 392 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 EML5Q05BV3 1969 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 H0Y626 953 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 F9P00740 461 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 SKILP12757 684 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 SDC4P31431 198 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 IL12RB1P42701 662 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 CXCR3P49682 368 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 KLHL30Q0D2K2 578 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 LMAN2Q12907 356 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 AUHQ13825 339 aaKnown RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ZNF234Q14588 700 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 C15orf59Q2T9L4 293 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 BRMS1LQ5PSV4 323 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ACAD10Q6JQN1 1059 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 KIAA1211LQ6NV74 962 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 DNAJC24Q6P3W2 148 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 RASSF3Q86WH2 238 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 RXFP2Q8WXD0 754 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 PGAP3Q96FM1 320 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 GABRG3Q99928 467 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ANLNQ9NQW6 1124 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ZNHIT6Q9NWK9 470 aaKnown RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 AIPL1Q9NZN9 384 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 THAP10Q9P2Z0 257 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-216ENST00000575599 GMEB2Q9UKD1 530 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 STON1Q9Y6Q2 735 aa13.7□□□□□ -0.22
RPAIN-216ENST00000575599 A0A1W2PQF6 199 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 A0A1W2PQJ5 194 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 DCLK1O15075 740 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-216ENST00000575599 TIMM44O43615 452 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 KRT3P12035 628 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 PDGFRAP16234 1089 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 CASP14P31944 242 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 PRKCIP41743 596 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 NUMBP49757 651 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 GSCP56915 257 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-216ENST00000575599 MTA1Q13330 715 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 STARD3Q14849 445 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FUT11Q495W5 492 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FNDC3BQ53EP0 1204 aaKnown RBP13.69□□□□□ -0.22
RPAIN-216ENST00000575599 TDRD12Q587J7 1177 aaKnown RBP13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FSCBQ5H9T9 825 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 MBLAC2Q68D91 279 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FBXL22Q6P050 247 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 ARCQ7LC44 396 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 ADIPOR2Q86V24 386 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FAM131BQ86XD5 332 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 OLIG1Q8TAK6 271 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 FIBINQ8TAL6 211 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 RUBCNQ92622 972 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 CAPN11Q9UMQ6 739 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 SNX10Q9Y5X0 201 aa13.69□□□□□ -0.22
RPAIN-216ENST00000575599 A0A1B0GVM2 712 aa13.68□□□□□ -0.22
RPAIN-216ENST00000575599 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
RPAIN-216ENST00000575599 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
RPAIN-216ENST00000575599 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms