RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 WNT1P04628 370 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SRPRAP08240 638 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 C5AR1P21730 350 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SLC8A1P32418 973 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 CD70P32970 193 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 GCLMP48507 274 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 CLDN6P56747 220 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 KCNC4Q03721 635 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 STK4Q13043 487 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 ZNF211Q13398 564 aaPredicted RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 CUL4BQ13620 913 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 C9orf64Q5T6V5 341 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 PIK3R6Q5UE93 754 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 RNF219Q5W0B1 726 aaPredicted RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 BSPRYQ5W0U4 402 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 NAPEPLDQ6IQ20 393 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SHC4Q6S5L8 630 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMG6-218ENST00000575454 PRPF39Q86UA1 669 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 MFN1Q8IWA4 741 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SIX6OS1Q8N1H7 587 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 FIBINQ8TAL6 211 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 TAS1R2Q8TE23 839 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 AZIN2Q96A70 460 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 ULBP1Q9BZM6 244 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 KCTD10Q9H3F6 313 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 CLMPQ9H6B4 373 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 CISHQ9NSE2 258 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 HESX1Q9UBX0 185 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 DMTF1Q9Y222 760 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 PI4KAP42356 2102 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 TNRC6BQ9UPQ9 1833 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3DA0A087WVF3 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3IA0A087WXS9 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3EA0A087X179 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3KA0A087X1G2 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3FA6NER0 549 aaPredicted RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 B8ZZF3 427 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3LB9A6J9 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 SLC7A4O43246 635 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 STX10O60499 249 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 MYL1P05976 194 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3HP0C7X1 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 RPL13P26373 211 aaKnown RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 NNMTP40261 264 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 CSKP41240 450 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 AFMP43652 599 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 ERVPABLB-1P60509 514 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 INSM1Q01101 510 aaPredicted RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 KCNJ12Q14500 433 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 STAT4Q14765 748 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 NFIL3Q16649 462 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 C1orf220Q5T0J3 134 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 KRT39Q6A163 491 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3GQ6DHY5 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3CQ6IPX1 549 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 PCSK4Q6UW60 755 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 ZC3H3Q8IXZ2 948 aaKnown RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D3Q8IZP1 549 aaPredicted RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 SCML4Q8N228 414 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 HJURPQ8NCD3 748 aaPredicted RBP9.34□□□□□ -0.91
SMG6-218ENST00000575454 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 DEPDC7Q96QD5 511 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 DPH1Q9BZG8 443 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 EBF2Q9HAK2 575 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 EVA1BQ9NVM1 165 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 SERGEFQ9UGK8 458 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 SFMBT1Q9UHJ3 866 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 KIAA1257Q9ULG3 409 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 FLNCQ14315 2725 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 PTPRDP23468 1912 aa9.34□□□□□ -0.91
SMG6-218ENST00000575454 C10orf142B7Z368 130 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 LATO43561 262 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ACSL4O60488 711 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 RNGTTO60942 597 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 C6P13671 934 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 NR2F2P24468 414 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 CASP1P29466 404 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 PSMC2P35998 433 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 LSSP48449 732 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 RAD23BP54727 409 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ADPRHP54922 357 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 DAB2P98082 770 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 BST2Q10589 180 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 BNIP3Q12983 259 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 CDH18Q13634 790 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ELAVL3Q14576 367 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms