RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CREB3O43889 395 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 CLDN11O75508 207 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 ARL4AP40617 200 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 TPI1P60174 286 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 FAM72AQ5TYM5 149 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 FAM72DQ6L9T8 149 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 FAM72BQ86X60 149 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 MAP7D3Q8IWC1 876 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 CCDC117Q8IWD4 279 aaPredicted RBP17.62■□□□□ 0.41
NUP88-210ENST00000574867 TTC8Q8TAM2 541 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 BHMTQ93088 406 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 SLC2A11Q9BYW1 496 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 NEU3Q9UQ49 428 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 DOCK4Q8N1I0 1966 aa17.62■□□□□ 0.41
NUP88-210ENST00000574867 MYOFQ9NZM1 2061 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
NUP88-210ENST00000574867 SPECC1L-ADORA2AF8WAN1 911 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 H3BRJ5 948 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 LUC7L3O95232 432 aaKnown RBP17.61■□□□□ 0.41
NUP88-210ENST00000574867 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
NUP88-210ENST00000574867 CTNNA2P26232 953 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 CTHP32929 405 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 HCAR3P49019 387 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 CDH4P55283 916 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 CDH6P55285 790 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 GAB4Q2WGN9 574 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 PREPLQ4J6C6 727 aaPredicted RBP17.61■□□□□ 0.41
NUP88-210ENST00000574867 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 ETFBKMTQ8IXQ9 262 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 CFAP52Q8N1V2 620 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 PCDH18Q9HCL0 1135 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 PLK2Q9NYY3 685 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 FBXL21Q9UKT6 434 aa17.61■□□□□ 0.41
NUP88-210ENST00000574867 USP27XA6NNY8 438 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 KIF5CO60282 957 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 FTCDO95954 541 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 KRT1P04264 644 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 TNNT1P13805 278 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 RHOQP17081 205 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 EPHB2P29323 1055 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 PRKCQQ04759 706 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 CDH18Q13634 790 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 MLF2Q15773 248 aaPredicted RBP17.6■□□□□ 0.41
NUP88-210ENST00000574867 SLC44A4Q53GD3 710 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ARTNQ5T4W7 220 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 RWDD4Q6NW29 188 aaKnown RBP17.6■□□□□ 0.41
NUP88-210ENST00000574867 RFX8Q6ZV50 586 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 MFN1Q8IWA4 741 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 KATNAL2Q8IYT4 538 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 UBL4BQ8N7F7 174 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 KCTD6Q8NC69 237 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 P2RY11Q96G91 374 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 MAGEB5Q9BZ81 275 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 CATSPERBQ9H7T0 1116 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 DONSONQ9NYP3 566 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 STIM2Q9P246 746 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ZNF487B1APH4 448 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ARSEP51690 589 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 ATP13A4Q4VNC1 1196 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 SUGP1Q8IWZ8 645 aaKnown RBP17.6■□□□□ 0.41
NUP88-210ENST00000574867 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
NUP88-210ENST00000574867 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 DCXO43602 365 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 TULP3O75386 442 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 GOT1P17174 413 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 SOX9P48436 509 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 IRAK1P51617 712 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 OXCT1P55809 520 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 ZXDAP98168 799 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CIR1Q86X95 450 aaPredicted RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 TSC1Q92574 1164 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CHFRQ96EP1 664 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 SHDQ96IW2 340 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 DNAJC17Q9NVM6 304 aaKnown RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 KLHL11Q9NVR0 708 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 TMEM248Q9NWD8 314 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 MPP6Q9NZW5 540 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CWC15Q9P013 229 aaKnown RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 DEC1Q9P2X7 70 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 ZKSCAN5Q9Y2L8 839 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 H0Y626 953 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 MAN2B1O00754 1011 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 DAPK3O43293 454 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 SLC34A2O95436 690 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 OPRD1P41143 372 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 MAPKAPK2P49137 400 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 DGKGP49619 791 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 ZNF177Q13360 481 aaPredicted RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 DPYSL3Q14195 570 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 ALFQ53S48 1182 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 TPRG1Q6ZUI0 275 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 SETD3Q86TU7 594 aaPredicted RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 C12orf40Q86WS4 652 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CARNMT1Q8N4J0 409 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 NAT16Q8N8M0 369 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms