RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CDH7Q9ULB5 785 aa17.23■□□□□ 0.35
LITAF-209ENST00000571688 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.23■□□□□ 0.35
LITAF-209ENST00000571688 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 MATN2O00339 956 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 SLC22A2O15244 555 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 CFLARO15519 480 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 HSPA4LO95757 839 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 OATP04181 439 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 GRIA1P42261 906 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TGFB2P61812 414 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 IL23RQ5VWK5 629 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TAAR1Q96RJ0 339 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 ACO2Q99798 780 aaKnown RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 ZNF341Q9BYN7 854 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 WDR41Q9HAD4 459 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■■□□ 18
LITAF-209ENST00000571688 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 HEY1Q9Y5J3 304 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 G3V3G9 751 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TFPTP0C1Z6 253 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 MYCLP12524 364 aaPredicted RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 NELFEP18615 380 aaKnown RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 PTGER2P43116 358 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 ATXN3P54252 364 aaPredicted RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 CCDC153Q494R4 210 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 SEZ6Q53EL9 994 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 NAPRTQ6XQN6 538 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 MCF2L2Q86YR7 1114 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 FIBCD1Q8N539 461 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 PQLC3Q8N755 202 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 ABHD8Q96I13 439 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TARS2Q9BW92 718 aaKnown RBP17.22■□□□□ 0.35
LITAF-209ENST00000571688 ZNF385DQ9H6B1 395 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 SLC38A7Q9NVC3 462 aa17.22■□□□□ 0.35
LITAF-209ENST00000571688 TRIM64CA6NLI5 447 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 TMEM114B3SHH9 223 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 HMGCRP04035 888 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 ENO3P13929 434 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 IL4RP24394 825 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 HMOX2P30519 316 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 TCF7P36402 384 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 AP3M2P53677 418 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 CTBSQ01459 385 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 RAB6CQ53S08 254 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 SH3PXD2AQ5TCZ1 1133 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 KRT80Q6KB66 452 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 RSBN1LQ6PCB5 846 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 CPSF7Q8N684 471 aaKnown RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 ATP6V0A1Q93050 837 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 BORCS5Q969J3 196 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 C12orf43Q96C57 262 aaKnown RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 MTMR10Q9NXD2 777 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 SEPT9Q9UHD8 586 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 SLC8A2Q9UPR5 921 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 PSAT1Q9Y617 370 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 FUOMA2VDF0 154 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 APOL1O14791 398 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 EDN1P05305 212 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 GMPRP36959 345 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 PPARGP37231 505 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 BCAR1P56945 870 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 NAB1Q13506 487 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 GPR141Q7Z602 305 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 CLVS1Q8IUQ0 354 aaPredicted RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 WDR49Q8IV35 697 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 BRSK2Q8IWQ3 736 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 LRRN4Q8WUT4 740 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 CDKL2Q92772 493 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 ATP6V1E2Q96A05 226 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 TDRD3Q9H7E2 651 aaKnown RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 CLK4Q9HAZ1 481 aaKnown RBP17.21■□□□□ 0.35
LITAF-209ENST00000571688 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 COQ6Q9Y2Z9 468 aa17.21■□□□□ 0.35
LITAF-209ENST00000571688 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 GOLGA8QA0A0J9YX86 632 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 GOLGA8OA6NCC3 632 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 GOLGA8NF8WBI6 632 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 STX16-NPEPL1H3BU86 382 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 FBP2O00757 339 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 P4HA1P13674 534 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ASPAP45381 313 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 PSMD7P51665 324 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ZNF143P52747 638 aaPredicted RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 SLC5A3P53794 718 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms