RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CNDP2Q96KP4 475 aaKnown RBP19.72■□□□□ 0.75
SCARF1-204ENST00000570902 DDX50Q9BQ39 737 aaKnown RBP19.72■□□□□ 0.75
SCARF1-204ENST00000570902 FZD4Q9ULV1 537 aa19.72■□□□□ 0.75
SCARF1-204ENST00000570902 TPX2Q9ULW0 747 aaKnown RBP19.72■□□□□ 0.75
SCARF1-204ENST00000570902 GOLGA4Q13439 2230 aaKnown RBP19.72■□□□□ 0.75
SCARF1-204ENST00000570902 CETN3O15182 167 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 ACSL4O60488 711 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 SIN3BO75182 1162 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 PRR29P0C7W0 189 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 VDRP11473 427 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 LCP1P13796 627 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 CD38P28907 300 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 ARRB1P49407 418 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-204ENST00000570902 CST6Q15828 149 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 FAM133BQ5BKY9 247 aaKnown RBP19.71■□□□□ 0.75
SCARF1-204ENST00000570902 LRRC69Q6ZNQ3 347 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 CCDC117Q8IWD4 279 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-204ENST00000570902 PIP4K2CQ8TBX8 421 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 SAP25Q8TEE9 199 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 IRGQQ8WZA9 623 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 MYO19Q96H55 970 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 CRELD1Q96HD1 420 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 OMDQ99983 421 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 MTG2Q9H4K7 406 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 GDF3Q9NR23 364 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 AASDHPPTQ9NRN7 309 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 STIM2Q9P246 746 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 ADAMTS1Q9UHI8 967 aa19.71■□□□□ 0.75
SCARF1-204ENST00000570902 GOLGA6L7A0A1B0GV03 622 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 A0A1W2PP55 124 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 TK2O00142 265 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 MID1O15344 667 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 RNASEH2AO75792 299 aaKnown RBP19.7■□□□□ 0.74
SCARF1-204ENST00000570902 SLC6A4P31645 630 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 CSKP41240 450 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 CCR5P51681 352 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 C19orf57Q0VDD7 668 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 SLC45A4Q5BKX6 768 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 DHX40Q8IX18 779 aaKnown RBP19.7■□□□□ 0.74
SCARF1-204ENST00000570902 LMLNQ96KR4 655 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 NEUROG2Q9H2A3 272 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 SERGEFQ9UGK8 458 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 COQ4Q9Y3A0 265 aa19.7■□□□□ 0.74
SCARF1-204ENST00000570902 PLXNA2O75051 1894 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 TARSL2A2RTX5 802 aaKnown RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 O00370 1275 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 RRP8O43159 456 aaKnown RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 WNT1P04628 370 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 SRPRAP08240 638 aaKnown RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 TBXAS1P24557 533 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 EIF2S3P41091 472 aaKnown RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 NDUFA8P51970 172 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 TBX4P57082 545 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 CDH18Q13634 790 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 PRAMEF14Q5SWL7 426 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 C9orf64Q5T6V5 341 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 TCERG1LQ5VWI1 586 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 LCLAT1Q6UWP7 414 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 MMAAQ8IVH4 418 aaKnown RBP19.69■□□□□ 0.74
SCARF1-204ENST00000570902 EEF2KMTQ96G04 330 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 MRGPRX3Q96LB0 322 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 SPATA32Q96LK8 384 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 NRSN2Q9GZP1 204 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 EBF2Q9HAK2 575 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 AK5Q9Y6K8 562 aa19.69■□□□□ 0.74
SCARF1-204ENST00000570902 FAM237AA0A1B0GTK4 181 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 EDDM13A0A1B0GTR0 161 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 MOCS3O95396 460 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 LTFP02788 710 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 EPHA8P29322 1005 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 SLC8A1P32418 973 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 ACADVLP49748 655 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 DNAJC3Q13217 504 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 SHBQ15464 509 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 CBWD6Q4V339 395 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 PKDCCQ504Y2 493 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 DCAF17Q5H9S7 520 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 CBWD3Q5JTY5 395 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 CBWD5Q5RIA9 395 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 SND1Q7KZF4 910 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 CARNMT1Q8N4J0 409 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 OXR1Q8N573 874 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 EID2Q8N6I1 236 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 ADAM32Q8TC27 787 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 PRICKLE1Q96MT3 831 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 INTS6Q9UL03 887 aaKnown RBP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 ERVW-1Q9UQF0 538 aa19.68■□□□□ 0.74
SCARF1-204ENST00000570902 TP53BP1Q12888 1972 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-204ENST00000570902 A0A1W2PR77 199 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 CBX4O00257 560 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 ADH1BP00325 375 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 GOT1P17174 413 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 C5AR1P21730 350 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 SEMG2Q02383 582 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 TARDBPQ13148 414 aaKnown RBP eCLIP19.67■□□□□ 0.74
SCARF1-204ENST00000570902 ILKQ13418 452 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 KCNJ12Q14500 433 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 HES3Q5TGS1 186 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 RNF219Q5W0B1 726 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-204ENST00000570902 NADSYN1Q6IA69 706 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms