RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	RHOT2	Q8IXI1	618 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ARFGAP1	Q8N6T3	406 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NIPA2	Q8N8Q9	360 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TERB1	Q8NA31	727 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	WFDC5	Q8TCV5	224 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	RFFL	Q8WZ73	363 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CLDN23	Q96B33	292 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	C1orf74	Q96LT6	269 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PEBP4	Q96S96	227 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NCAPG	Q9BPX3	1015 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	OR12D3	Q9UGF7	316 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PCSK1N	Q9UHG2	260 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FZD10	Q9ULW2	581 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TFR2	Q9UP52	801 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SLC27A6	Q9Y2P4	619 aa		11.94	□□□□□ -0.5
ATP2A3-208	ENST00000570845		A0A1B0GVM2	712 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TBC1D3B	A6NDS4	549 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TCAF2	A6NFQ2	919 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TMEM110-MUSTN1	A8MSY1	372 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845		K7EQS6	105 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SRGAP2	O75044	1071 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	RNF40	O75150	1001 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LUC7L3	O95232	432 aa	Known RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MIP	P30301	263 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	AVPR2	P30518	371 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SSR1	P43307	286 aa	Known RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MAGEA9	P43362	315 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TNFRSF4	P43489	277 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CDH18	Q13634	790 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	GEN1	Q17RS7	908 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	C5orf22	Q49AR2	442 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FBXO43	Q4G163	708 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845		Q6ZS52	159 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ANKS1B	Q7Z6G8	1248 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZNF683	Q8IZ20	524 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CCAR2	Q8N163	923 aa	Known RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PYROXD2	Q8N2H3	581 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SYNPO	Q8N3V7	929 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZNF557	Q8N988	423 aa	Predicted RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ACRBP	Q8NEB7	543 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CCDC112	Q8NEF3	446 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SNRNP25	Q9BV90	132 aa	Known RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MAGEB5	Q9BZ81	275 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	OSBPL2	Q9H1P3	480 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ABCB8	Q9NUT2	735 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	GPATCH2L	Q9NWQ4	482 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DLGAP2	Q9P1A6	1054 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LCMT1	Q9UIC8	334 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	GGA2	Q9UJY4	613 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	AP4E1	Q9UPM8	1137 aa		11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	REXO2	Q9Y3B8	237 aa	Known RBP	11.93	□□□□□ -0.5
ATP2A3-208	ENST00000570845	IGLV3-10	A0A075B6K4	115 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845		A0A0A0MRY4	1105 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PRRT4	C9JH25	899 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FAM72C	H0Y354	149 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MTA2	O94776	668 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CNTN5	O94779	1100 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PROSC	O94903	275 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TCF4	P15884	667 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	HLA-F	P30511	346 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CD70	P32970	193 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PCK1	P35558	622 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CDH4	P55283	916 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NRG1	Q02297	640 aa	Predicted RBP	11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MESD	Q14696	234 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ALF	Q53S48	1182 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	C2orf27A	Q580R0	203 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ERMARD	Q5T6L9	678 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FAM72A	Q5TYM5	149 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FAM72D	Q6L9T8	149 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CHST9	Q7L1S5	443 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KIAA1328	Q86T90	577 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FAM72B	Q86X60	149 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LRRC8A	Q8IWT6	810 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	RPLP0P6	Q8NHW5	317 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CCDC26	Q8TAB7	109 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FIBIN	Q8TAL6	211 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TBC1D31	Q96DN5	1066 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DESI2	Q9BSY9	194 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CHRD	Q9H2X0	955 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZWILCH	Q9H900	591 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MPP6	Q9NZW5	540 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	USP18	Q9UMW8	372 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LRRK1	Q38SD2	2015 aa		11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.92	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	RCCD1	A6NED2	376 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ANTXRL	A6NF34	631 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DRGX	A6NNA5	263 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CREB3	O43889	395 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CLDN11	O75508	207 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LRIG2	O94898	1065 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PABPC1	P11940	636 aa	Known RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	L1CAM	P32004	1257 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MAN1A1	P33908	653 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TIE1	P35590	1138 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	GJC1	P36383	396 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ARHGAP25	P42331	645 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NOP2	P46087	812 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms