RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 NUCB2P80303 420 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 HNRNPA1L2Q32P51 320 aaKnown RBP21.86■■□□□ 1.09
PKD1-240ENST00000570253 SLC45A4Q5BKX6 768 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 PPM1KQ8N3J5 372 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 PDCD7Q8N8D1 485 aaKnown RBP21.86■■□□□ 1.09
PKD1-240ENST00000570253 KDM1BQ8NB78 822 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 HNRNPLLQ8WVV9 542 aaKnown RBP21.86■■□□□ 1.09
PKD1-240ENST00000570253 TTC17Q96AE7 1141 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 GOLPH3LQ9H4A5 285 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 KNL1Q8NG31 2342 aa21.86■■□□□ 1.09
PKD1-240ENST00000570253 GOLGA6L7A0A1B0GV03 622 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 A0A1W2PPC4 97 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 PIK3R2O00459 728 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 KCNK3O14649 394 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 VILLO15195 856 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 YKT6O15498 198 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 RNASEH2AO75792 299 aaKnown RBP21.85■■□□□ 1.09
PKD1-240ENST00000570253 DKK1O94907 266 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 IGLV3-27P01718 113 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 CDK4P11802 303 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 HNF1BP35680 557 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 CSKP41240 450 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 PNOCQ13519 176 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 CNGA2Q16280 664 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 COBLL1Q53SF7 1204 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 LAYNQ6UX15 382 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 DHX40Q8IX18 779 aaKnown RBP21.85■■□□□ 1.09
PKD1-240ENST00000570253 WFDC5Q8TCV5 224 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 SLC35F5Q8WV83 523 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 FAM149B1Q96BN6 582 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 AASDHPPTQ9NRN7 309 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 SLCO1B1Q9Y6L6 691 aa21.85■■□□□ 1.09
PKD1-240ENST00000570253 TARSL2A2RTX5 802 aaKnown RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 TRABD2BA6NFA1 517 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 PAPSS1O43252 624 aaPredicted RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 SIN3BO75182 1162 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 APOEP02649 317 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 ITGAVP06756 1048 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 SRPRAP08240 638 aaKnown RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 SLC6A4P31645 630 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 FMO5P49326 533 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 IL9RQ01113 521 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 CYP4F3Q08477 520 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 NNTQ13423 1086 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 CST6Q15828 149 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 CCDC40Q4G0X9 1142 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 PKDCCQ504Y2 493 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 FAM133BQ5BKY9 247 aaKnown RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 PMF1Q6P1K2 205 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 OR2T34Q8NGX1 318 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 SLC35C1Q96A29 364 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 ELF4Q99607 663 aaPredicted RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 MIS12Q9H081 205 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 TJP2Q9UDY2 1190 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 FZD4Q9ULV1 537 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 TLR6Q9Y2C9 796 aa21.84■■□□□ 1.09
PKD1-240ENST00000570253 GOLGA4Q13439 2230 aaKnown RBP21.84■■□□□ 1.09
PKD1-240ENST00000570253 A0A1B0GTQ1 180 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 EDDM13A0A1B0GTR0 161 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 A0A1W2PP55 124 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 CAPN9O14815 690 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 PSMA7O14818 248 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 PPP1R2P41236 205 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 ARRB1P49407 418 aaPredicted RBP21.83■■□□□ 1.09
PKD1-240ENST00000570253 GALCP54803 685 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 SMAD1Q15797 465 aaKnown RBP21.83■■□□□ 1.09
PKD1-240ENST00000570253 ANKRD40Q6AI12 368 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 NCEH1Q6PIU2 408 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 SND1Q7KZF4 910 aaKnown RBP eCLIP21.83■■□□□ 1.09
PKD1-240ENST00000570253 TMPRSS12Q86WS5 348 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 ZC3H3Q8IXZ2 948 aaKnown RBP21.83■■□□□ 1.09
PKD1-240ENST00000570253 UBR7Q8N806 425 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 SMARCE1Q969G3 411 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 LRIG1Q96JA1 1093 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 GDF3Q9NR23 364 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 ST7Q9NRC1 585 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 PCDHGA1Q9Y5H4 931 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 NBEAQ8NFP9 2946 aa21.83■■□□□ 1.09
PKD1-240ENST00000570253 ITPR1Q14643 2758 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 APC2O95996 2303 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 MID1O15344 667 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 LDOC1O95751 146 aaPredicted RBP21.82■■□□□ 1.08
PKD1-240ENST00000570253 MOCS2O96007 188 aaPredicted RBP21.82■■□□□ 1.08
PKD1-240ENST00000570253 ADH1BP00325 375 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 IGHV4-34P06331 123 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 CD38P28907 300 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 ACADSBP45954 432 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 PITRM1Q5JRX3 1037 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 DHRS13Q6UX07 377 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 MMAAQ8IVH4 418 aaKnown RBP21.82■■□□□ 1.08
PKD1-240ENST00000570253 SCUBE3Q8IX30 993 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 OXR1Q8N573 874 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 TFAP2BQ92481 460 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 SLC6A18Q96N87 628 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 SLC12A6Q9UHW9 1150 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 ERVW-1Q9UQF0 538 aa21.82■■□□□ 1.08
PKD1-240ENST00000570253 FASNP49327 2511 aaKnown RBP21.82■■□□□ 1.08
PKD1-240ENST00000570253 ENC1O14682 589 aa21.81■■□□□ 1.08
PKD1-240ENST00000570253 LUC7L3O95232 432 aaKnown RBP21.81■■□□□ 1.08
PKD1-240ENST00000570253 BRD2P25440 801 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms