RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 STAMBPL1Q96FJ0 436 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PEBP4Q96S96 227 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ZYG11BQ9C0D3 744 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ARHGEF38Q9NXL2 777 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PPARGC1AQ9UBK2 798 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 RASA4BC9J798 803 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 POC1B-GALNT4F8VUJ3 575 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 RASA4O43374 803 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 NBNO60934 754 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 DDHD2O94830 711 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ZWINTO95229 277 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TIMP1P01033 207 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 GJA8P48165 433 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TUBP50607 506 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SLC18A1P54219 525 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 CCL23P55773 120 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PPIDQ08752 370 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 CBLBQ13191 982 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TRIM60Q495X7 471 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ANKRD20A2Q5SQ80 823 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ANKRD20A1Q5TYW2 823 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 GKAP1Q5VSY0 366 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 ANKRD20A3Q5VUR7 823 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 KCTD16Q68DU8 428 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 KLHDC10Q6PID8 442 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 C3orf62Q6ZUJ4 267 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PAQR9Q6ZVX9 377 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 NLRP9Q7RTR0 991 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 CTAGE3PQ8IX95 158 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 NAT8LQ8N9F0 302 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 COLGALT1Q8NBJ5 622 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 GSDMBQ8TAX9 411 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PRKD2Q9BZL6 878 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SIK2Q9H0K1 926 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TDRD15B5MCY1 1934 aaKnown RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 SCN1AP35498 2009 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 RNF103O00237 685 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 UPP2O95045 317 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ASPHQ12797 758 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 MMRN1Q13201 1228 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 MRPL58Q14197 206 aaKnown RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 TMED2Q15363 201 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 PARP15Q460N3 678 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 SPANXN3Q5MJ09 141 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CYS1Q717R9 158 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 TAC4Q86UU9 113 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ARFGAP1Q8N6T3 406 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CCDC185Q8N715 623 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 LEMD2Q8NC56 503 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 C3orf58Q8NDZ4 430 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 FBXO22Q8NEZ5 403 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CALML6Q8TD86 181 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 FATE1Q969F0 183 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 AZIN2Q96A70 460 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 IGSF21Q96ID5 467 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 TSGA13Q96PP4 275 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 WBP1LQ9NX94 342 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 GOLGA8CPA6NN73 597 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 MEIS3P2A8K0S8 358 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 E7ESA3 106 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 LRG1P02750 347 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ADH1AP07327 375 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 IVDP26440 423 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CA8P35219 290 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 NDUFV1P49821 464 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 TAF5Q15542 800 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 NCBP2-AS2Q69YL0 99 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 LRRC6Q86X45 466 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CHSY1Q86X52 802 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ZNF280BQ86YH2 543 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CPNE8Q86YQ8 564 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 PQLC3Q8N755 202 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 OR10T2Q8NGX3 314 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CPT1BQ92523 772 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 EDEM1Q92611 657 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 MRPS31Q92665 395 aaKnown RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 KCNK16Q96T55 309 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 LBHD1Q9BQE6 289 aaPredicted RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 EPN3Q9H201 632 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 NEUROG2Q9H2A3 272 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 FAM96AQ9H5X1 160 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ENTPD7Q9NQZ7 604 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 VPS45Q9NRW7 570 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 RNF19AQ9NV58 838 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 FARP1Q9Y4F1 1045 aaPredicted RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 MTMR11A4FU01 709 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 ZBBXA8MT70 800 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 AGPSO00116 658 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 C1RP00736 705 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 SNRPAP09012 282 aaKnown RBP6.19□□□□□ -1.42
CYLD-216ENST00000569891 PGAM1P18669 254 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 CDH17Q12864 832 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 DPYSQ14117 519 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 DAB2IPQ5VWQ8 1189 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 TXNRD3NBQ6F5E7 133 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 SLC8B1Q6J4K2 584 aa6.19□□□□□ -1.42
CYLD-216ENST00000569891 LRRC8BQ6P9F7 803 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms