RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SARM1Q6SZW1 724 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 RFX8Q6ZV50 586 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 APTXQ7Z2E3 356 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 KLHDC9Q8NEP7 349 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SCFD1Q8WVM8 642 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PABPC5Q96DU9 382 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 SPDL1Q96EA4 605 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SEC16BQ96JE7 1060 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PHF12Q96QT6 1004 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TCF25Q9BQ70 676 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 NAT10Q9H0A0 1025 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 GLRX2Q9NS18 164 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 KCNH7Q9NS40 1196 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SAMSN1Q9NSI8 373 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 TRMT13Q9NUP7 481 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 PPARGC1AQ9UBK2 798 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 POLR2AP24928 1970 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 GJB6O95452 261 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TDP2O95551 362 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 HSD3B1P14060 373 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 HTR2BP41595 481 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 LY6KQ17RY6 165 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 KRTCAP3Q53RY4 240 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SLC30A9Q6PML9 568 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 AGMOQ6ZNB7 445 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 TBCKQ8TEA7 893 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TRIT1Q9H3H1 467 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 SDHAF3Q9NRP4 125 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 IFNKQ9P0W0 207 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TBX21Q9UL17 535 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 OR6C75A6NL08 312 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ZNF286BP0CG31 522 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 PRG2P13727 222 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 GRK6P43250 576 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 DGKKQ5KSL6 1271 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 JMJD6Q6NYC1 403 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 POTEDQ86YR6 584 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 HID1Q8IV36 788 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 FAM126BQ8IXS8 530 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 GPR65Q8IYL9 337 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 LILRB4Q8NHJ6 448 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 DEPDC1BQ8WUY9 529 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 RIN2Q8WYP3 895 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 CENPIQ92674 756 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 DTNBP1Q96EV8 351 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 INPP4AQ96PE3 977 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 SCPEP1Q9HB40 452 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 PFDN4Q9NQP4 134 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 DYRK4Q9NR20 520 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 PCDHGA2Q9Y5H1 932 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 HTTP42858 3142 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 SH3D21A4FU49 640 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 LRRIQ3A6PVS8 624 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 H0YAE9 185 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 HSMCR30P0CW71 290 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 CPEP16870 476 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 PTPN2P17706 415 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 SREBF1P36956 1147 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 CCNFP41002 786 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 AFF1P51825 1210 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 RNASE9P60153 205 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 KIZQ2M2Z5 673 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ERCC6LQ2NKX8 1250 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ARL13BQ3SXY8 428 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ZNF569Q5MCW4 686 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ADAT2Q7Z6V5 191 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 TOR1AIP2Q8NFQ8 470 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 STN1Q9H668 368 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 HAUS4Q9H6D7 363 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ZFP14Q9HCL3 533 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 TRPM5Q9NZQ8 1165 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 NCKAP1Q9Y2A7 1128 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 ATAD5Q96QE3 1844 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 OR6C74A6NCV1 312 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 NDUFS2O75306 463 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 SNRNP70P08621 437 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 CLTAP09496 248 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 C6P13671 934 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 EZRP15311 586 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 B2MP61769 119 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 CCZ1BP86790 482 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 CCZ1P86791 482 aaPredicted RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 FBXO48Q5FWF7 155 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 CLVS2Q5SYC1 327 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 SLC27A1Q6PCB7 646 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 USP17L6PQ6QN14 398 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 R3HCC1LQ7Z5L2 792 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 MTDHQ86UE4 582 aaKnown RBP6.84□□□□□ -1.31
SMG1-217ENST00000569764 DAGLBQ8NCG7 672 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 SLC35B4Q969S0 331 aa6.84□□□□□ -1.31
SMG1-217ENST00000569764 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms